RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 DIAPH2O60879 1101 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 SKAP2O75563 359 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 PPP1R37O75864 691 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 TRIM37O94972 964 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ATP6V1G2O95670 118 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 MAPK4P31152 587 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 LRRC63Q05C16 580 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 DRP2Q13474 957 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 RASA3Q14644 834 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 GRM4Q14833 912 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ANKRD20A8PQ5CZ79 823 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ARHGEF18Q6ZSZ5 1173 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 DNAAF5Q86Y56 855 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ARHGAP24Q8N264 748 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 PPM1KQ8N3J5 372 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 SCOCQ9UIL1 159 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ANAPC4Q9UJX5 808 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 MYCNP04198 464 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 PAX7P23759 505 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 PPP2R5CQ13362 524 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 RBBP5Q15291 538 aaKnown RBP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 RABL6Q3YEC7 729 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 FAM153CQ494X1 144 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 FAM83BQ5T0W9 1011 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 CYB5D1Q6P9G0 228 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 GJB7Q6PEY0 223 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 RAPGEF5Q92565 580 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 KAZALD1Q96I82 304 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 INTS2Q9H0H0 1204 aaKnown RBP5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ANLNQ9NQW6 1124 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 SEPT10Q9P0V9 454 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 FAM153AQ9UHL3 310 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ZBTB1Q9Y2K1 713 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 OVOS2A0A0G2JMS6 1433 aa5.39□□□□□ -1.55
SYNE2-223ENST00000557005 ABL1P00519 1130 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SCTRP47872 440 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SMTNP53814 917 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SLMAPQ14BN4 828 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 ANKRD20A3Q5VUR7 823 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 TPTE2Q6XPS3 522 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SCYL3Q8IZE3 742 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CNPY4Q8N129 248 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 HDAC7Q8WUI4 952 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 PACSIN1Q9BY11 444 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 IMPG2Q9BZV3 1241 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NBPF3Q9H094 633 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 VCX3BQ9H321 246 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NOD2Q9HC29 1040 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 INTS13Q9NVM9 706 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 DNAJC12Q9UKB3 198 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 PTPRUQ92729 1446 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 hCG_2014768A0A024R1R8 64 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 A0A1W2PQJ5 194 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NBPF26B4DH59 902 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 IGF2BP3O00425 579 aaKnown RBP eCLIP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 GAS7O60861 476 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 MFAP3P55082 362 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 RBM26Q5T8P6 1007 aaKnown RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CAPRIN2Q6IMN6 1127 aaKnown RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 WDR93Q6P2C0 686 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NBPF10Q6P3W6 841 aaKnown RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SFR1Q86XK3 245 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NBPF15Q8N660 670 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 FBXO41Q8TF61 875 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 C1orf54Q8WWF1 131 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 HOOK2Q96ED9 719 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NUP85Q9BW27 656 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 KANSL2Q9H9L4 492 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SAYSD1Q9NPB0 183 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 ERBB3P21860 1342 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 AKAP12Q02952 1782 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 A0A0G2JND7 137 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 TULP2O00295 520 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 MAPK13O15264 365 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CYP27B1O15528 508 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 ORC4O43929 436 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 HOXA13P31271 388 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NXNQ6DKJ4 435 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 PDXDC2PQ6P474 469 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 DCUN1D2Q6PH85 259 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SGMS1Q86VZ5 419 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 SLC35G2Q8TBE7 412 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 HEMGNQ9BXL5 484 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 MAP2K7O14733 419 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 TDP2O95551 362 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 GAS8O95995 478 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 HSPA9P38646 679 aaKnown RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 KCNH2Q12809 1159 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 NAB2Q15742 525 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CDC37Q16543 378 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-223ENST00000557005 MAP7D1Q3KQU3 841 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CASC4Q6P4E1 433 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 CTAGE3PQ8IX95 158 aa5.38□□□□□ -1.55
SYNE2-223ENST00000557005 AENQ8WTP8 325 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms