RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PIGBQ92521 554 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 BRF1Q92994 677 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 SLC12A9Q9BXP2 914 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 EHMT1Q9H9B1 1298 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 EXOC6BQ9Y2D4 811 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 PMF1-BGLAPU3KQ54 211 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 MEGF6O75095 1541 aa5.41□□□□□ -1.54
SRP54-212ENST00000556992 PHRF1Q9P1Y6 1649 aaKnown RBP5.41□□□□□ -1.54
SRP54-212ENST00000556992 KDM6AO15550 1401 aaPredicted RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 PXDNLA1KZ92 1463 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 COL5A2P05997 1499 aaPredicted RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 K7ESM1 405 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 REC8O95072 547 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 IGKV5-2P06315 115 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 SDSP20132 328 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 MX1P20591 662 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 RBM25P49756 843 aaKnown RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 MFAP1P55081 439 aaKnown RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 PRR5P85299 388 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 DCAF15Q66K64 600 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 LRP10Q7Z4F1 713 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 JAMLQ86YT9 394 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 CLASRPQ8N2M8 674 aaKnown RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 GPATCH3Q96I76 525 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 EAF1Q96JC9 268 aaPredicted RBP5.4□□□□□ -1.54
SRP54-212ENST00000556992 MYD88Q99836 296 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 KCNQ5Q9NR82 932 aa5.4□□□□□ -1.54
SRP54-212ENST00000556992 AOX1Q06278 1338 aa5.4□□□□□ -1.55
SRP54-212ENST00000556992 CAMTA1Q9Y6Y1 1673 aa5.4□□□□□ -1.55
SRP54-212ENST00000556992 COL16A1Q07092 1604 aaPredicted RBP5.39□□□□□ -1.55
SRP54-212ENST00000556992 A0A087WZG4 1122 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 F8W031 263 aaPredicted RBP5.39□□□□□ -1.55
SRP54-212ENST00000556992 ERC2O15083 957 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 A1BGP04217 495 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 ACRP10323 421 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 CNR2P34972 360 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 NR1I3Q14994 352 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 DDB1Q16531 1140 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 CCDC144CPQ8IYA2 1237 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 CCDC191Q8NCU4 936 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 OTUD7AQ8TE49 926 aaPredicted RBP5.39□□□□□ -1.55
SRP54-212ENST00000556992 GPR20Q99678 358 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 CWC25Q9NXE8 425 aaPredicted RBP5.39□□□□□ -1.55
SRP54-212ENST00000556992 SPATA31A1Q5TZJ5 1347 aa5.39□□□□□ -1.55
SRP54-212ENST00000556992 TRPM3Q9HCF6 1732 aaPredicted RBP5.39□□□□□ -1.55
SRP54-212ENST00000556992 ROBO1Q9Y6N7 1651 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 RGPD8O14715 1765 aaPredicted RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 TNFRSF10CO14798 259 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 EPB41L2O43491 1005 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 GLRX3O76003 335 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 GSNP06396 782 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 GSPT1P15170 499 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 IFNGR1P15260 489 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 RBM6P78332 1123 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 DLX2Q07687 328 aaPredicted RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 APOBRQ0VD83 1088 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 TCIRG1Q13488 830 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 HSP90AB3PQ58FF7 597 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 PAQR3Q6TCH7 311 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 KIF6Q6ZMV9 814 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 UNC5CLQ8IV45 518 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 C7orf61Q8IZ16 206 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 NLGN1Q8N2Q7 840 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 SMARCC1Q92922 1105 aaPredicted RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 SNX21Q969T3 373 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 BORCS6Q96GS4 357 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 SUCLG2Q96I99 432 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 TRAIPQ9BWF2 469 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 BICC1Q9H694 974 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 ECHDC1Q9NTX5 307 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 GGT7Q9UJ14 662 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 DBR1Q9UK59 544 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 ASAP1Q9ULH1 1129 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 FAN1Q9Y2M0 1017 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 CCDC9Q9Y3X0 531 aaKnown RBP5.38□□□□□ -1.55
SRP54-212ENST00000556992 AFF2P51816 1311 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 SPATA31A5Q5VU36 1347 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 TTC41PQ6P2S7 1318 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 SPATA31A7Q8IWB4 1347 aa5.38□□□□□ -1.55
SRP54-212ENST00000556992 ALS2Q96Q42 1657 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 XIRP1Q702N8 1843 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 ERVV-1B6SEH8 477 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 TP53P04637 393 aaPredicted RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 CYBBP04839 570 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 CYP19A1P11511 503 aaPredicted RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 ENDOUP21128 410 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 CCNFP41002 786 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 HTRA3P83110 453 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 TARBP2Q15633 366 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 VPS72Q15906 364 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 RABL6Q3YEC7 729 aaPredicted RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 HLA-DQA1Q5Y7H0 255 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 UBE3BQ7Z3V4 1068 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 SAPCD2Q86UD0 394 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 TICAM2Q86XR7 235 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms