RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 INSRRP14616 1297 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 RBM10P98175 930 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 PAK2Q13177 524 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 MTMR1Q13613 665 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 SART3Q15020 963 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 PKN1Q16512 942 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 FBXL6Q8N531 539 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 MICAL1Q8TDZ2 1067 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 CDHR1Q96JP9 859 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 PRRX2Q99811 253 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 MYL10Q9BUA6 226 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 TLE6Q9H808 572 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 SEC63Q9UGP8 760 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
HNRNPC-227ENST00000556897 IGSF9BQ9UPX0 1349 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 RRN3P2A6NIE6 340 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 E7EWF7 191 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 ANTXR2P58335 489 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 PTH1RQ03431 593 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 SIGLEC14Q08ET2 396 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 TMEM266Q2M3C6 531 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 VN1R2Q8NFZ6 395 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 TRAPPC12Q8WVT3 735 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 PCYT2Q99447 389 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 JPH1Q9HDC5 661 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 TRPV2Q9Y5S1 764 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 UBIAD1Q9Y5Z9 338 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 SQORQ9Y6N5 450 aa10.36□□□□□ -0.75
HNRNPC-227ENST00000556897 ST18O60284 1047 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 KIF5BP33176 963 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 VCPP55072 806 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 UBE2SQ16763 222 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 ZNF654Q8IZM8 581 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 ASIC4Q96FT7 647 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 CELF4Q9BZC1 486 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 AZI2Q9H6S1 392 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 TLR9Q9NR96 1032 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 GINS2Q9Y248 185 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 PCDHB7Q9Y5E2 793 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 PCDHA2Q9Y5H9 948 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 LOXHD1Q8IVV2 1947 aa10.35□□□□□ -0.75
HNRNPC-227ENST00000556897 KMT2EQ8IZD2 1858 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 PLXNA4Q9HCM2 1894 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 GFRA3O60609 400 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 FGF18O76093 207 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 DDAH1O94760 285 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 PLEKHA8P1O95397 391 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 ATF7P17544 494 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SMARCA1P28370 1054 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SARSP49591 514 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 ERVFC1P60507 584 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 KRT76Q01546 638 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 UBE3AQ05086 875 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 DUSP6Q16828 381 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SPOUT1Q5T280 376 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SUSD6Q92537 303 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 LY9Q9HBG7 655 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 JADE2Q9NQC1 790 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 HCSTQ9UBK5 93 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 SLC9A2Q9UBY0 812 aa10.34□□□□□ -0.75
HNRNPC-227ENST00000556897 KDM3AQ9Y4C1 1321 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 TBKBP1A7MCY6 615 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 MAFGO15525 162 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 MGEA5O60502 916 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 RXRAP19793 462 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 SP100P23497 879 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 AVPR2P30518 371 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 STAT5BP51692 787 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 ACTR2P61160 394 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 AAMPQ13685 434 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 PTPN21Q16825 1174 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 FAM102BQ5T8I3 360 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 MTHFD1LQ6UB35 978 aa10.33□□□□□ -0.76
HNRNPC-227ENST00000556897 PLPPR4Q7Z2D5 763 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms