RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 FAM49AQ9H0Q0 323 aaPredicted RBP19.53■□□□□ 0.72
CHGA-206ENST00000556876 EPHX3Q9H6B9 360 aa19.53■□□□□ 0.72
CHGA-206ENST00000556876 TBC1D22BQ9NU19 505 aa19.53■□□□□ 0.72
CHGA-206ENST00000556876 IGSF9BQ9UPX0 1349 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 IGKV6D-21A0A0A0MT36 114 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 STXBP3O00186 592 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 BACH1O14867 736 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 GNA11P29992 359 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 SSTR3P32745 418 aaPredicted RBP19.52■□□□□ 0.72
CHGA-206ENST00000556876 SETQ01105 290 aaPredicted RBP19.52■□□□□ 0.72
CHGA-206ENST00000556876 KRT76Q01546 638 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 FUT2Q10981 343 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 ZNF484Q5JVG2 852 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 MIS18BP1Q6P0N0 1132 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 POP1Q99575 1024 aaKnown RBP19.52■□□□□ 0.72
CHGA-206ENST00000556876 RC3H2Q9HBD1 1191 aaKnown RBP19.52■□□□□ 0.72
CHGA-206ENST00000556876 C6orf50Q9HD87 102 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 COL1A2P08123 1366 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 MICAL3Q7RTP6 2002 aa19.52■□□□□ 0.72
CHGA-206ENST00000556876 KLF18A0A0U1RQI7 1052 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CDC45O75419 566 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CYP3A4P08684 503 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 ARP10275 920 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CD52P31358 61 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CLK2P49760 499 aaKnown RBP19.51■□□□□ 0.71
CHGA-206ENST00000556876 AKAP17AQ02040 695 aaKnown RBP19.51■□□□□ 0.71
CHGA-206ENST00000556876 MTHFD1LQ6UB35 978 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CYP2W1Q8TAV3 490 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 BICD2Q8TD16 824 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 ATP8B4Q8TF62 1192 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 AGO3Q9H9G7 860 aaKnown RBP19.51■□□□□ 0.71
CHGA-206ENST00000556876 LRFN2Q9ULH4 789 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 PADI3Q9ULW8 664 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 CEP131Q9UPN4 1083 aa19.51■□□□□ 0.71
CHGA-206ENST00000556876 TCF20Q9UGU0 1960 aaKnown RBP19.5■□□□□ 0.71
CHGA-206ENST00000556876 GPR182O15218 404 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 MMP1P03956 469 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 SCG2P13521 617 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHGA-206ENST00000556876 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
CHGA-206ENST00000556876 ABHD15Q6UXT9 468 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 EP400NLQ6ZTU2 488 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 SMAP1Q8IYB5 467 aaPredicted RBP19.5■□□□□ 0.71
CHGA-206ENST00000556876 AAASQ9NRG9 546 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 C1orf112Q9NSG2 853 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 CLDND1Q9NY35 253 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 BRPF3Q9ULD4 1205 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 PTPRSQ13332 1948 aa19.5■□□□□ 0.71
CHGA-206ENST00000556876 SIP14410 1827 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
CHGA-206ENST00000556876 KLRC1P26715 233 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 ITGB3BPQ13352 177 aaPredicted RBP19.49■□□□□ 0.71
CHGA-206ENST00000556876 CSPP1Q1MSJ5 1256 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 CTC1Q2NKJ3 1217 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 ZNF746Q6NUN9 644 aaPredicted RBP19.49■□□□□ 0.71
CHGA-206ENST00000556876 PDXDC2PQ6P474 469 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 FBXL16Q8N461 479 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 ZMYND12Q9H0C1 365 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 ZNF302Q9NR11 478 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 PLAGL2Q9UPG8 496 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 PCDHB7Q9Y5E2 793 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 BRWD1Q9NSI6 2320 aa19.49■□□□□ 0.71
CHGA-206ENST00000556876 KAT6AQ92794 2004 aa19.48■□□□□ 0.71
CHGA-206ENST00000556876 PRR33A8MZF0 331 aa19.48■□□□□ 0.71
CHGA-206ENST00000556876 H3BQ06 376 aaPredicted RBP19.48■□□□□ 0.71
CHGA-206ENST00000556876 SARSP49591 514 aaKnown RBP19.48■□□□□ 0.71
CHGA-206ENST00000556876 ADHFE1Q8IWW8 467 aa19.48■□□□□ 0.71
CHGA-206ENST00000556876 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
CHGA-206ENST00000556876 CRIPAKQ8N1N5 446 aa19.48■□□□□ 0.71
CHGA-206ENST00000556876 BBXQ8WY36 941 aaPredicted RBP19.48■□□□□ 0.71
CHGA-206ENST00000556876 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
CHGA-206ENST00000556876 GRM6O15303 877 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 MAGEB2O15479 319 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 RPS6KA5O75582 802 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 LINC00271P0C7V0 271 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 IL9P15248 144 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 UBE3AQ05086 875 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 CKAP2LQ8IYA6 745 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 CCDC148Q8NFR7 591 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 FAM167AQ96KS9 214 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 ZNF577Q9BSK1 485 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 PCDHB12Q9Y5F1 795 aa19.47■□□□□ 0.71
CHGA-206ENST00000556876 COL4A4P53420 1690 aaPredicted RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 DENND3A2RUS2 1198 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 PRPF3O43395 683 aaKnown RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 PSAPP07602 524 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 PSMA5P28066 241 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 TMOD1P28289 359 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 CRYBB1P53674 252 aaPredicted RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 NFX1Q12986 1120 aaKnown RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 PDE12Q6L8Q7 609 aaKnown RBP19.46■□□□□ 0.71
CHGA-206ENST00000556876 SWSAP1Q6NVH7 229 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 SLC24A5Q71RS6 500 aa19.46■□□□□ 0.71
CHGA-206ENST00000556876 RTN4RL1Q86UN2 441 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms