RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 STK25O00506 426 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 TREHO43280 583 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 DKC1O60832 514 aaKnown RBP eCLIP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CKBP12277 381 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 INSRRP14616 1297 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CSF2RAP15509 400 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CCL23P55773 120 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 PLCB4Q15147 1175 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CALCRLQ16602 461 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 TRIM71Q2Q1W2 868 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 MIER3Q7Z3K6 550 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 RSPH3Q86UC2 560 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 DHX38Q92620 1227 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 HAS1Q92839 578 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 MTIF3Q9H2K0 278 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 TRIP12Q14669 1992 aaPredicted RBP11.9□□□□□ -0.5
MTHFD1-214ENST00000556771 UMODL1Q5DID0 1318 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 CHMP2AO43633 222 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 IQCF3P0C7M6 154 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 HIC1Q14526 733 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 LRIT3Q3SXY7 679 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF484Q5JVG2 852 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
MTHFD1-214ENST00000556771 KIF28PB7ZC32 967 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 MCM7P33993 719 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 THPOP40225 353 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 PSMC5P62195 406 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 RILPL1Q5EBL4 403 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 MARCH8Q5T0T0 291 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 SCLYQ96I15 445 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 NRBP2Q9NSY0 501 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
MTHFD1-214ENST00000556771 SMIM35A0A1B0GVV1 85 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 RSPH10B2B2RC85 870 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 LAD1O00515 517 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 MAGEB2O15479 319 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF862O60290 1169 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 FGBP02675 491 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 OATP04181 439 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 P4HBP07237 508 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 RSPH10BP0C881 870 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 ACTN1P12814 892 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 EPHB4P54760 987 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 IGBP1P78318 339 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 PRKCEQ02156 737 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 EPHA7Q15375 998 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 SHHQ15465 462 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 XKR3Q5GH77 459 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF618Q5T7W0 954 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 BRAPQ7Z569 592 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 NME8Q8N427 588 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 GJA10Q969M2 543 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 MTMR9Q96QG7 549 aa11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.511e-8■■■□□ 16.4
MTHFD1-214ENST00000556771 TTC12Q9H892 705 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-214ENST00000556771 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 EFCAB14O75071 495 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 BAIAP3O94812 1187 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 CXCL10P02778 98 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 OR52Z1P0C646 297 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 ATP4AP20648 1035 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 QARSP47897 775 aaKnown RBP11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 C9orf50Q5SZB4 431 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 RASIP1Q5U651 963 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 NCAPH2Q6IBW4 605 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 FAM43BQ6ZT52 329 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 ZNF365Q70YC5 407 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 WNT8BQ93098 351 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 PPME1Q9Y570 386 aa11.86□□□□□ -0.51
MTHFD1-214ENST00000556771 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms