RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 FAM49AQ9H0Q0 323 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-217ENST00000556533 NRBP2Q9NSY0 501 aa19.24■□□□□ 0.67
PSEN1-217ENST00000556533 RBAK-RBAKDNI3L0D1 243 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 PPP2R5CQ13362 524 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 NBR1Q14596 966 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 TMEM240Q5SV17 173 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 B3GNT9Q6UX72 402 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 BANK1Q8NDB2 785 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 TMEM60Q9H2L4 133 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 PCDHA12Q9UN75 941 aa19.23■□□□□ 0.67
PSEN1-217ENST00000556533 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-217ENST00000556533 RSPH10B2B2RC85 870 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 RSPH10BP0C881 870 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 KLRC1P26715 233 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 RFC2P35250 354 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 PRKCEQ02156 737 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 ZNF484Q5JVG2 852 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 PSRC1Q6PGN9 363 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-217ENST00000556533 OTOP2Q7RTS6 562 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 DNAJB3Q8WWF6 145 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-217ENST00000556533 FAM167AQ96KS9 214 aa19.22■□□□□ 0.67
PSEN1-217ENST00000556533 TTC12Q9H892 705 aaPredicted RBP19.22■□□□□ 0.67
PSEN1-217ENST00000556533 MBLAC1A4D2B0 266 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-217ENST00000556533 DDX11L8A8MPP1 907 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 ZNF862O60290 1169 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 OATP04181 439 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
PSEN1-217ENST00000556533 PDCP20941 246 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 TRAPPC10P48553 1259 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 TAF2Q6P1X5 1199 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 MTHFD1LQ6UB35 978 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 RSPH3Q86UC2 560 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 INTS4Q96HW7 963 aaKnown RBP19.21■□□□□ 0.67
PSEN1-217ENST00000556533 MTMR9Q96QG7 549 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 LTBP2Q14767 1821 aa19.21■□□□□ 0.67
PSEN1-217ENST00000556533 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 TOB1P50616 345 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-217ENST00000556533 RBL2Q08999 1139 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 EPHA7Q15375 998 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 SEPT9Q9UHD8 586 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-217ENST00000556533 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 PCDHA2Q9Y5H9 948 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 IGSF9BQ9UPX0 1349 aa19.2■□□□□ 0.66
PSEN1-217ENST00000556533 ZBTB42B2RXF5 422 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 NBNO60934 754 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 OR52Z1P0C646 297 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 TECP42680 631 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 QARSP47897 775 aaKnown RBP19.19■□□□□ 0.66
PSEN1-217ENST00000556533 PSMC5P62195 406 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 CYP4A11Q02928 519 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 TMEM62Q0P6H9 643 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 GPNMBQ14956 572 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 TRAF7Q6Q0C0 670 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 TPH2Q8IWU9 490 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 METTL13Q8N6R0 699 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 SPRYD3Q8NCJ5 442 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 VWCEQ96DN2 955 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 DYDC2Q96IM9 177 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 RGL1Q9NZL6 768 aa19.19■□□□□ 0.66
PSEN1-217ENST00000556533 TMEM150BA6NC51 233 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 SOX1O00570 391 aaPredicted RBP19.18■□□□□ 0.66
PSEN1-217ENST00000556533 CAND2O75155 1236 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 PARNO95453 639 aaKnown RBP19.18■□□□□ 0.66
PSEN1-217ENST00000556533 P4HBP07237 508 aaKnown RBP19.18■□□□□ 0.66
PSEN1-217ENST00000556533 PFKMP08237 780 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 ACTN1P12814 892 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 SPIRE1Q08AE8 756 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 CTTNQ14247 550 aaKnown RBP19.18■□□□□ 0.66
PSEN1-217ENST00000556533 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 MTERF2Q49AM1 385 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 XKR3Q5GH77 459 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 HERVK_113Q902F9 699 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 SH2D3AQ9BRG2 576 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 MTIF3Q9H2K0 278 aaKnown RBP19.18■□□□□ 0.66
PSEN1-217ENST00000556533 CEP131Q9UPN4 1083 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 COL1A2P08123 1366 aa19.18■□□□□ 0.66
PSEN1-217ENST00000556533 C22orf31O95567 290 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 CHRNA1P02708 482 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 SYT1P21579 422 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 PTGDRQ13258 359 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 ORC2Q13416 577 aaPredicted RBP19.17■□□□□ 0.66
PSEN1-217ENST00000556533 LRIT3Q3SXY7 679 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 RILPL1Q5EBL4 403 aa19.17■□□□□ 0.66
PSEN1-217ENST00000556533 EIF2AK1Q9BQI3 630 aaKnown RBP19.17■□□□□ 0.66
PSEN1-217ENST00000556533 CXXC1Q9P0U4 656 aaPredicted RBP19.17■□□□□ 0.66
PSEN1-217ENST00000556533 SMIM35A0A1B0GVV1 85 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 POTEMA6NI47 508 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 M0QZ92 97 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 DKC1O60832 514 aaKnown RBP eCLIP19.16■□□□□ 0.66
PSEN1-217ENST00000556533 STBD1O95210 358 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 FXR1P51114 621 aaKnown RBP eCLIP19.16■□□□□ 0.66
PSEN1-217ENST00000556533 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
PSEN1-217ENST00000556533 IER5Q5VY09 327 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 PLA2G4FQ68DD2 849 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 C4orf32Q8N8J7 132 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 LRCH3Q96II8 777 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 LXNQ9BS40 222 aa19.16■□□□□ 0.66
PSEN1-217ENST00000556533 NIFKQ9BYG3 293 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms