RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 AXDND1Q5T1B0 1012 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-240ENST00000556339 FERMT3Q86UX7 667 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 TMEM87AQ8NBN3 555 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 RTF1Q92541 710 aaKnown RBP5.12□□□□□ -1.59
ATXN3-240ENST00000556339 TM9SF2Q99805 663 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 TMPRSS5Q9H3S3 457 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 NUDT5Q9UKK9 219 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 FHOD1Q9Y613 1164 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 MYH14Q7Z406 1995 aaKnown RBP5.12□□□□□ -1.59
ATXN3-240ENST00000556339 KIF7Q2M1P5 1343 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 PKD1L3Q7Z443 1732 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 TOMM70O94826 608 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 U2AF1L5P0DN76 240 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 CYP19A1P11511 503 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 IFNGR1P15260 489 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 TM4SF1P30408 202 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 MC3RP41968 323 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 U2AF1Q01081 240 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 EFEMP1Q12805 493 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 VWA3BQ502W6 1294 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 PPFIBP1Q86W92 1011 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 C2CD5Q86YS7 1000 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 TTLL6Q8N841 843 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 USP33Q8TEY7 942 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 FCRL3Q96P31 734 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 RXFP1Q9HBX9 757 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 NARFQ9UHQ1 456 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 PLA2G2DQ9UNK4 145 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 KDM2BQ8NHM5 1336 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 USP42Q9H9J4 1324 aaKnown RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 NCAPD2Q15021 1401 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 COL24A1Q17RW2 1714 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 TOGARAM1Q9Y4F4 1720 aa5.11□□□□□ -1.59
ATXN3-240ENST00000556339 N4BP2Q86UW6 1770 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-240ENST00000556339 POLRMTO00411 1230 aaKnown RBP5.1□□□□□ -1.59
ATXN3-240ENST00000556339 KDM6AO15550 1401 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ASGR2P07307 311 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ATF2P15336 505 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 KCNA3P22001 575 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 CNR2P34972 360 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 KRTAP10-2P60368 255 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 DDR1Q08345 913 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ANKRD39Q53RE8 183 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 SAPCD2Q86UD0 394 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 LZTR1Q8N653 840 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ADCY4Q8NFM4 1077 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 DDX1Q92499 740 aaKnown RBP5.1□□□□□ -1.59
ATXN3-240ENST00000556339 SRRTQ9BXP5 876 aaKnown RBP5.1□□□□□ -1.59
ATXN3-240ENST00000556339 GZF1Q9H116 711 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-240ENST00000556339 NMRK2Q9NPI5 230 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ANKRD26Q9UPS8 1709 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ZBTB1Q9Y2K1 713 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 RWDD3Q9Y3V2 267 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 ZNF451Q9Y4E5 1061 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 CEP350Q5VT06 3117 aa5.1□□□□□ -1.59
ATXN3-240ENST00000556339 PLEKHG2Q9H7P9 1386 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 SOS1Q07889 1333 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-240ENST00000556339 STXBP3O00186 592 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 A1BGP04217 495 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 GUCY2CP25092 1073 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 PRKAR2BP31323 418 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 SEPHS1P49903 392 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 ST5P78524 1137 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 MRPL58Q14197 206 aaKnown RBP5.09□□□□□ -1.59
ATXN3-240ENST00000556339 ZFYVE27Q5T4F4 411 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 EEF1DP3Q658K8 133 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 ZNF790Q6PG37 636 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 UNC5AQ6ZN44 842 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 TTLL7Q6ZT98 887 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 ADAT2Q7Z6V5 191 aaKnown RBP5.09□□□□□ -1.59
ATXN3-240ENST00000556339 TAB3Q8N5C8 712 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-240ENST00000556339 NGEFQ8N5V2 710 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 IL17REQ8NFR9 667 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 ZNF496Q96IT1 587 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-240ENST00000556339 CRBNQ96SW2 442 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 GBP3Q9H0R5 595 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 BCAS3Q9H6U6 928 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 NTMQ9P121 344 aa5.09□□□□□ -1.59
ATXN3-240ENST00000556339 CICQ96RK0 1608 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 PXDNLA1KZ92 1463 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 KDRP35968 1356 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 COL15A1P39059 1388 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 KCNQ3O43525 872 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 SMARCA5O60264 1052 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 SNRPA1P09661 255 aaKnown RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 PMLP29590 882 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 ZNF76P36508 570 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 EIF5P55010 431 aaKnown RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 ZYXQ15942 572 aaKnown RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 TBC1D9BQ66K14 1250 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 MCM10Q7L590 875 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 B3GNT8Q7Z7M8 397 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 NBPF5PQ86XG9 351 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-240ENST00000556339 CARFQ8N187 725 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 SMARCC2Q8TAQ2 1214 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 PEX11GQ96HA9 241 aa5.08□□□□□ -1.6
ATXN3-240ENST00000556339 PHACTR3Q96KR7 559 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms