RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	ELP3	Q9H9T3	547 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	TMEM260	Q9NX78	707 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	MAP3K20	Q9NYL2	800 aa	Known RBP	6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	CCDC39	Q9UFE4	941 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	GDF2	Q9UK05	429 aa	Predicted RBP	6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	PPP1R9A	Q9ULJ8	1098 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	RABGAP1	Q9Y3P9	1069 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	AFG3L2	Q9Y4W6	797 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	SBF1	O95248	1867 aa		6.28	□□□□□ -1.4
ATL1-208	ENST00000556067	GREB1L	Q9C091	1923 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067		A0A1B0GVL5	298 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	VWA3A	A6NCI4	1184 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	TGFBR3L	H3BV60	316 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	PPP1R11	O60927	126 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CFB	P00751	764 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	OR52Z1	P0C646	297 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	ARAF	P10398	606 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	ALAS1	P13196	640 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	PFKFB1	P16118	471 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	LIG1	P18858	919 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	PRPH	P41219	470 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	UBA7	P41226	1012 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	USP11	P51784	963 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	OAZ1	P54368	228 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	ZNF445	P59923	1031 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	IRX3	P78415	501 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	ATP2C1	P98194	919 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	PPIL2	Q13356	520 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	LAMC2	Q13753	1193 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	NPY5R	Q15761	445 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CAMK4	Q16566	473 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CALCRL	Q16602	461 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	OCLN	Q16625	522 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	UBE2S	Q16763	222 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	TKFC	Q3LXA3	575 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	KIAA1755	Q5JYT7	1200 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	RESP18	Q5W5W9	173 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	MAP1S	Q66K74	1059 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	LRSAM1	Q6UWE0	723 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CAPN12	Q6ZSI9	719 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CEP57L1	Q8IYX8	460 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CPXCR1	Q8N123	301 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CNNM3	Q8NE01	707 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	EDARADD	Q8WWZ3	215 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CLP1	Q92989	425 aa	Known RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	SHISA4	Q96DD7	197 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	AK8	Q96MA6	479 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	TIGD1	Q96MW7	591 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	SLC30A3	Q99726	388 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	TMEM63C	Q9P1W3	806 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	USP25	Q9UHP3	1055 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	FBXO2	Q9UK22	296 aa	Predicted RBP	6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	KCNH3	Q9ULD8	1083 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	FZD1	Q9UP38	647 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	KCNH4	Q9UQ05	1017 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	SNCAIP	Q9Y6H5	919 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	MYH4	Q9Y623	1939 aa		6.27	□□□□□ -1.41
ATL1-208	ENST00000556067	MYPN	Q86TC9	1320 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CARNS1	A5YM72	827 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SHISA8	B8ZZ34	492 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	ZNF202	O95125	648 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SMC2	O95347	1197 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CAVIN2	O95810	425 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	ADH6	P28332	368 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	MRE11	P49959	708 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	IDH3A	P50213	366 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	NDUFA8	P51970	172 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	TBC1D8B	Q0IIM8	1120 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SPEM2	Q0P670	501 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SNAPC2	Q13487	334 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	PLS1	Q14651	629 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	C11orf91	Q3C1V1	193 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	EARS2	Q5JPH6	523 aa	Known RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	PPP4R3A	Q6IN85	833 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	USP17L6P	Q6QN14	398 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CATSPERG	Q6ZRH7	1159 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SYT9	Q86SS6	491 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	FCHSD1	Q86WN1	690 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SLFN12	Q8IYM2	578 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	FMR1NB	Q8N0W7	255 aa	Predicted RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	MB21D1	Q8N884	522 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	IQUB	Q8NA54	791 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	ZNF526	Q8TF50	670 aa	Predicted RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	OPTN	Q96CV9	577 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CALML4	Q96GE6	196 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CDK5RAP3	Q96JB5	506 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CLIC6	Q96NY7	704 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	ANO3	Q9BYT9	981 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	MAF1	Q9H063	256 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	NAT10	Q9H0A0	1025 aa	Known RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	CSRNP2	Q9H175	543 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SLC38A10	Q9HBR0	1119 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	GBA2	Q9HCG7	927 aa	Predicted RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	RAVER2	Q9HCJ3	691 aa	Known RBP	6.26	□□□□□ -1.41

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