RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SOX10P56693 466 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 IRX5P78411 483 aaPredicted RBP8.55□□□□□ -1.04
TDP1-214ENST00000556063 CYP4A11Q02928 519 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 ZNF484Q5JVG2 852 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 C4orf19Q8IY42 314 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 BANK1Q8NDB2 785 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 ATP8B4Q8TF62 1192 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 DYDC2Q96IM9 177 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 GBP4Q96PP9 640 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 PCYT2Q99447 389 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 HSD17B14Q9BPX1 270 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 PYM1Q9BRP8 204 aaKnown RBP8.55□□□□□ -1.04
TDP1-214ENST00000556063 LXNQ9BS40 222 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 HTATIP2Q9BUP3 242 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 CCSER1Q9C0I3 900 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 NT5C3AQ9H0P0 336 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 FAM13BQ9NYF5 915 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 RGL1Q9NZL6 768 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 FBXO2Q9UK22 296 aaPredicted RBP8.55□□□□□ -1.04
TDP1-214ENST00000556063 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
TDP1-214ENST00000556063 NRCAMQ92823 1304 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 COL1A2P08123 1366 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 DCDC2CA8MYV0 355 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 GOLGA6L22H0YM25 854 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 ARVCFO00192 962 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 MAGEB2O15479 319 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 SLITRK3O94933 977 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 LYPLA2O95372 231 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 OATP04181 439 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 RPLP2P05387 115 aaKnown RBP8.54□□□□□ -1.04
TDP1-214ENST00000556063 COL6A1P12109 1028 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 PSMC6P62333 389 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 PRKCEQ02156 737 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 PPFIA1Q13136 1202 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 CTTNQ14247 550 aaKnown RBP8.54□□□□□ -1.04
TDP1-214ENST00000556063 PLCB4Q15147 1175 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 ZRSR1Q15695 479 aaKnown RBP8.54□□□□□ -1.04
TDP1-214ENST00000556063 IL17AQ16552 155 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 NBPF20Q3BBV1 942 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 CABP7Q86V35 215 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 CATSPER3Q86XQ3 398 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 KAT2BQ92831 832 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 JPH2Q9BR39 696 aaPredicted RBP8.54□□□□□ -1.04
TDP1-214ENST00000556063 CSRNP2Q9H175 543 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 ANKEF1Q9NU02 776 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
TDP1-214ENST00000556063 DNM3Q9UQ16 869 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 TELO2Q9Y4R8 837 aa8.54□□□□□ -1.04
TDP1-214ENST00000556063 LOXHD1Q8IVV2 1947 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 ZNF862O60290 1169 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 MED24O75448 989 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 SMIM10L2AP0DMW4 78 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 SMIM10L2BP0DMW5 78 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 INSRRP14616 1297 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 CDC25AP30304 524 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 YWHABP31946 246 aaKnown RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 ATN1P54259 1190 aaPredicted RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 XKR9Q5GH70 373 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 RRAGBQ5VZM2 374 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 ADALQ6DHV7 355 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 CCDC73Q6ZRK6 1079 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 TRMT1LQ7Z2T5 733 aaKnown RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 DIS3LQ8TF46 1054 aaKnown RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 CCDC34Q96HJ3 373 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 TOX2Q96NM4 488 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 NIFKQ9BYG3 293 aaKnown RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 HDAC6Q9UBN7 1215 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 GTF2IRD1Q9UHL9 959 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
TDP1-214ENST00000556063 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
TDP1-214ENST00000556063 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 ARHGEF35A5YM69 484 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 PP2D1A8MPX8 630 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 SPATA31C1P0DKV0 1188 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 CMA1P23946 247 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 TMOD1P28289 359 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 RFC5P40937 340 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 CDK7P50613 346 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 GRIN1Q05586 938 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 TBC1D8BQ0IIM8 1120 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 SNX17Q15036 470 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 GRIK4Q16099 956 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms