RNA–Protein interactions for RNA: ENST00000555933.1

TRIM9-205, Transcript of tripartite motif containing 9, humanhuman

TSL 3

Gene TRIM9, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-205ENST00000555933 ZNF652Q9Y2D9 606 aa7.44□□□□□ -1.22
TRIM9-205ENST00000555933 R3HCC1Q9Y3T6 440 aaKnown RBP7.44□□□□□ -1.22
TRIM9-205ENST00000555933 NPFFR2Q9Y5X5 522 aa7.44□□□□□ -1.22
TRIM9-205ENST00000555933 MYBBP1AQ9BQG0 1328 aaKnown RBP7.44□□□□□ -1.22
TRIM9-205ENST00000555933 RIMS1Q86UR5 1692 aaKnown RBP7.44□□□□□ -1.22
TRIM9-205ENST00000555933 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
TRIM9-205ENST00000555933 PTCH1Q13635 1447 aa7.44□□□□□ -1.22
TRIM9-205ENST00000555933 H7BY64 318 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 STAT5AP42229 794 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 GJA9P57773 515 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 DDR2Q16832 855 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 PRRT2Q7Z6L0 340 aaPredicted RBP7.43□□□□□ -1.22
TRIM9-205ENST00000555933 STK32CQ86UX6 486 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 ADAMTS17Q8TE56 1095 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 CHAMP1Q96JM3 812 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 LNPKQ9C0E8 428 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 CLDND1Q9NY35 253 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 DUSP10Q9Y6W6 482 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 ANKRD36BQ8N2N9 1353 aa7.43□□□□□ -1.22
TRIM9-205ENST00000555933 BLMP54132 1417 aaPredicted RBP7.43□□□□□ -1.22
TRIM9-205ENST00000555933 KLF4O43474 513 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 RPL13P26373 211 aaKnown RBP7.42□□□□□ -1.22
TRIM9-205ENST00000555933 ITGA1P56199 1179 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 KRTAP10-2P60368 255 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 PLP2Q04941 152 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 MAP4K2Q12851 820 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 KCTD13Q8WZ19 329 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 DDX1Q92499 740 aaKnown RBP7.42□□□□□ -1.22
TRIM9-205ENST00000555933 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
TRIM9-205ENST00000555933 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 CENPBP07199 599 aaPredicted RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 CHRNA2Q15822 529 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 EMC4Q5J8M3 183 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 STEAP3Q658P3 488 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 TTLL6Q8N841 843 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 CDIP1Q9H305 208 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 CPSF1Q10570 1443 aaKnown RBP7.41□□□□□ -1.22
TRIM9-205ENST00000555933 CDC42BPGQ6DT37 1551 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
TRIM9-205ENST00000555933 TCRBV5S2A0A599 114 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 DLX3O60479 287 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 TADA3O75528 432 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 CNR2P34972 360 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.22
TRIM9-205ENST00000555933 PRAM1Q96QH2 718 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 YIPF4Q9BSR8 244 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 EPB41L1Q9H4G0 881 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 PIK3R4Q99570 1358 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 ATP7BP35670 1465 aa7.4□□□□□ -1.22
TRIM9-205ENST00000555933 SSH2Q76I76 1423 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 NSD3Q9BZ95 1437 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 A0A1W2PP64 1363 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 EVC2Q86UK5 1308 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 PPP2R1AP30153 589 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 NKX3-2P78367 333 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 NFKB2Q00653 900 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 EFEMP1Q12805 493 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRIM9-205ENST00000555933 SGSM3Q96HU1 749 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 SLC12A5Q9H2X9 1139 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 GPR27Q9NS67 375 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 DTLQ9NZJ0 730 aa7.39□□□□□ -1.23
TRIM9-205ENST00000555933 NWD1Q149M9 1564 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 NRKQ7Z2Y5 1582 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 COL3A1P02461 1466 aaPredicted RBP7.38□□□□□ -1.23
TRIM9-205ENST00000555933 NSD2O96028 1365 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 ZBED9Q6R2W3 1325 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 MSCO60682 206 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 DGKIO75912 1065 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 ADAM9Q13443 819 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
TRIM9-205ENST00000555933 FAM26FQ5R3K3 315 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 USP53Q70EK8 1073 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 TOE1Q96GM8 510 aaKnown RBP7.38□□□□□ -1.23
TRIM9-205ENST00000555933 SHPRHQ149N8 1683 aa7.38□□□□□ -1.23
TRIM9-205ENST00000555933 POLR3AO14802 1390 aaPredicted RBP7.37□□□□□ -1.23
TRIM9-205ENST00000555933 AARSD1Q9BTE6 412 aaKnown RBP7.37□□□□□ -1.23
TRIM9-205ENST00000555933 PHF20Q9BVI0 1012 aa7.37□□□□□ -1.23
TRIM9-205ENST00000555933 ARHGEF4Q9NR80 690 aa7.37□□□□□ -1.23
TRIM9-205ENST00000555933 MYOTQ9UBF9 498 aa7.37□□□□□ -1.23
TRIM9-205ENST00000555933 PPARGC1AQ9UBK2 798 aaKnown RBP7.37□□□□□ -1.23
TRIM9-205ENST00000555933 CNOT11Q9UKZ1 510 aaKnown RBP7.37□□□□□ -1.23
TRIM9-205ENST00000555933 SMG6Q86US8 1419 aaKnown RBP7.36□□□□□ -1.23
TRIM9-205ENST00000555933 MON2Q7Z3U7 1717 aa7.36□□□□□ -1.23
TRIM9-205ENST00000555933 ANKRD26Q9UPS8 1709 aa7.36□□□□□ -1.23
TRIM9-205ENST00000555933 K7ESM1 405 aa7.36□□□□□ -1.23
TRIM9-205ENST00000555933 DDX3XO00571 662 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRIM9-205ENST00000555933 RAB33AQ14088 237 aa7.36□□□□□ -1.23
TRIM9-205ENST00000555933 SPATS1Q496A3 300 aa7.36□□□□□ -1.23
TRIM9-205ENST00000555933 MCTP2Q6DN12 878 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms