RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GPAT2Q6NUI2 795 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CAPN12Q6ZSI9 719 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ANKRD23Q86SG2 305 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ERO1BQ86YB8 467 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
SLIRP-204ENST00000555890 BLIDQ8IZY5 108 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 STAG2Q8N3U4 1231 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ZNF713Q8N859 430 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ZNF511Q8NB15 262 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ENGASEQ8NFI3 743 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 FAM151AQ8WW52 585 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 SDF4Q9BRK5 362 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 RBCK1Q9BYM8 510 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 TMEM39BQ9GZU3 492 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CABP5Q9NP86 173 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 FAM13BQ9NYF5 915 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 SIPA1L1O43166 1804 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 A0A1B0GVL5 298 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 DDTLA6NHG4 134 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 PDHXO00330 501 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 GOLGA8HP0CJ92 632 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 MARCKSP29966 332 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 GNA11P29992 359 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 TOB1P50616 345 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 RIPPLY3P57055 190 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 RING1Q06587 406 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 NR5A1Q13285 461 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 SNAPC2Q13487 334 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 ABCB5Q2M3G0 1257 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 C4orf48Q5BLP8 95 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 GPATCH4Q5T3I0 446 aaKnown RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 FKBP1CQ5VVH2 108 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 FAM117BQ6P1L5 589 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 TATDN1Q6P1N9 297 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 RBM43Q6ZSC3 357 aaKnown RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 HEATR3Q7Z4Q2 680 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 ZFPM1Q8IX07 1006 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 FMR1NBQ8N0W7 255 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 DAGLBQ8NCG7 672 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 MKL1Q969V6 931 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 CCDC34Q96HJ3 373 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 TIGD1Q96MW7 591 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 FUCA2Q9BTY2 467 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 PANK2Q9BZ23 570 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 GOLPH3LQ9H4A5 285 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 C6orf50Q9HD87 102 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 NYAP2Q9P242 653 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 HERC5Q9UII4 1024 aaKnown RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 HOOK1Q9UJC3 728 aaKnown RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 PCDHA4Q9UN74 947 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 MORC2Q9Y6X9 1032 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-204ENST00000555890 NBEAQ8NFP9 2946 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 COL4A3Q01955 1670 aa7.72□□□□□ -1.17
SLIRP-204ENST00000555890 FAM237AA0A1B0GTK4 181 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 CCDC194A0A1B0GVG4 234 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF202O95125 648 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 NTRK1P04629 796 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SNHG28P0DPA3 235 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 PDHBP11177 359 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 PFKFB1P16118 471 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 ATP2B1P20020 1258 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SYKP43405 635 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TNNI2P48788 182 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 NDUFA8P51970 172 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 NAPAP54920 295 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 VCPP55072 806 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TYRO3Q06418 890 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TRIM32Q13049 653 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SNW1Q13573 536 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SOWAHCQ53LP3 525 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TTC38Q5R3I4 469 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 RESP18Q5W5W9 173 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 CKAP2LQ8IYA6 745 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 RNF214Q8ND24 703 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 DCAF4Q8WV16 495 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TNFRSF25Q93038 417 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 FERMT2Q96AC1 680 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 TRIM44Q96DX7 344 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 PURBQ96QR8 312 aaKnown RBP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 PPP1R9BQ96SB3 815 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 SLC6A16Q9GZN6 736 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 RIOX1Q9H6W3 641 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.71□□□□□ -1.18
SLIRP-204ENST00000555890 VAT1LQ9HCJ6 419 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
SLIRP-204ENST00000555890 BARHL2Q9NY43 387 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms