RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 MYO9BQ13459 2157 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 SIP14410 1827 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 MSH4O15457 936 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 PSAPP07602 524 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 NEK4P51957 841 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 NECAB1Q8N987 351 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 USP38Q8NB14 1042 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 IL17RAQ96F46 866 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 RAD9AQ99638 391 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
NEDD1-208ENST00000555806 PCDHA2Q9Y5H9 948 aa20.84■□□□□ 0.93
NEDD1-208ENST00000555806 WDR64B1ANS9 1081 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 M0QZ92 97 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 M0R2N6 131 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 EDIL3O43854 480 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 GAS7O60861 476 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 MKRN4PQ13434 485 aaPredicted RBP20.83■□□□□ 0.93
NEDD1-208ENST00000555806 NONOQ15233 471 aaKnown RBP eCLIP20.83■□□□□ 0.93
NEDD1-208ENST00000555806 NPY5RQ15761 445 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 IER5Q5VY09 327 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 MTHFD1LQ6UB35 978 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 TRMT1LQ7Z2T5 733 aaKnown RBP20.83■□□□□ 0.93
NEDD1-208ENST00000555806 KRT25Q7Z3Z0 450 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 GABBR1Q9UBS5 961 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
NEDD1-208ENST00000555806 CCDC194A0A1B0GVG4 234 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 RFXAPO00287 272 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 CHMP2AO43633 222 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 TDP2O95551 362 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 TMEM62Q0P6H9 643 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 LPIN1Q14693 890 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 ME3Q16798 604 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 LRCH2Q5VUJ6 765 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 MICALL1Q8N3F8 863 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 WASF1Q92558 559 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 PHF20Q9BVI0 1012 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 TEKT3Q9BXF9 490 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 TRPV2Q9Y5S1 764 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 COL1A2P08123 1366 aa20.82■□□□□ 0.92
NEDD1-208ENST00000555806 SMIM35A0A1B0GVV1 85 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 EPOPA6NHQ4 379 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 UPP2O95045 317 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 LARGE1O95461 756 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 CTDNEP1O95476 244 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 KLRC1P26715 233 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 CCDC85BQ15834 202 aaPredicted RBP20.81■□□□□ 0.92
NEDD1-208ENST00000555806 INF2Q27J81 1249 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 Q4G0T1 1027 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 ZNF484Q5JVG2 852 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 FBXO47Q5MNV8 452 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 TSHZ1Q6ZSZ6 1077 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 SPRED2Q7Z698 418 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 SLC5A5Q92911 643 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 GTF3C6Q969F1 213 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 GJA10Q969M2 543 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 RIT2Q99578 217 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 DISC1Q9NRI5 854 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 INSL6Q9Y581 213 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 MAFBQ9Y5Q3 323 aaPredicted RBP20.81■□□□□ 0.92
NEDD1-208ENST00000555806 EYSQ5T1H1 3165 aa20.81■□□□□ 0.92
NEDD1-208ENST00000555806 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-208ENST00000555806 GTPBP6O43824 516 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-208ENST00000555806 ATP4AP20648 1035 aa20.8■□□□□ 0.92
NEDD1-208ENST00000555806 BBXQ8WY36 941 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-208ENST00000555806 UNC45AQ9H3U1 944 aa20.8■□□□□ 0.92
NEDD1-208ENST00000555806 DDX25Q9UHL0 483 aaKnown RBP20.8■□□□□ 0.92
NEDD1-208ENST00000555806 MTUS1Q9ULD2 1270 aa20.8■□□□□ 0.92
NEDD1-208ENST00000555806 IGSF9BQ9UPX0 1349 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 CHD7Q9P2D1 2997 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
NEDD1-208ENST00000555806 CYP3A7-CYP3A51PA0A087WV96 503 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 LINC01553A4QN01 128 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 DLL1O00548 723 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 CYP3A7P24462 503 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 SFNP31947 248 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 JAK3P52333 1124 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 LETM2Q2VYF4 491 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 MOXD1Q6UVY6 613 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 NME8Q8N427 588 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 TOP1MTQ969P6 601 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 FAM167AQ96KS9 214 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 TGS1Q96RS0 853 aaKnown RBP20.79■□□□□ 0.92
NEDD1-208ENST00000555806 YME1L1Q96TA2 773 aa20.79■□□□□ 0.92
NEDD1-208ENST00000555806 COL4A4P53420 1690 aaPredicted RBP20.78■□□□□ 0.92
NEDD1-208ENST00000555806 CD52P31358 61 aa20.78■□□□□ 0.92
NEDD1-208ENST00000555806 MIER3Q7Z3K6 550 aa20.78■□□□□ 0.92
NEDD1-208ENST00000555806 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
NEDD1-208ENST00000555806 AGO3Q9H9G7 860 aaKnown RBP20.78■□□□□ 0.92
NEDD1-208ENST00000555806 CEP131Q9UPN4 1083 aa20.78■□□□□ 0.92
NEDD1-208ENST00000555806 GINS2Q9Y248 185 aa20.78■□□□□ 0.92
NEDD1-208ENST00000555806 ZBTB42B2RXF5 422 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 PSMD10O75832 226 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 ERVK-21P61565 698 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 HTRA4P83105 476 aaPredicted RBP20.77■□□□□ 0.92
NEDD1-208ENST00000555806 PIK3AP1Q6ZUJ8 805 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 NEK8Q86SG6 692 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 METTL13Q8N6R0 699 aa20.77■□□□□ 0.92
NEDD1-208ENST00000555806 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.92
NEDD1-208ENST00000555806 OXER1Q8TDS5 423 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms