RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 DNM1LO00429 736 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ZNF862O60290 1169 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 F2P00734 622 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ASGR1P07306 291 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 PFKFB1P16118 471 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ZRSR1Q15695 479 aaKnown RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ECM1Q16610 540 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 NIFKQ9BYG3 293 aaKnown RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 CUEDC2Q9H467 287 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 ANKEF1Q9NU02 776 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
SHMT2-221ENST00000555773 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 PPME1Q9Y570 386 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 HAS3O00219 553 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 POLR2DO15514 142 aaKnown RBP13.93□□□□□ -0.18
SHMT2-221ENST00000555773 HBP1O60381 514 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 STBD1O95210 358 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 OATP04181 439 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-221ENST00000555773 ATP4AP20648 1035 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
SHMT2-221ENST00000555773 SYKP43405 635 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 NDUFA8P51970 172 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 ACLYP53396 1101 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 FAM160A1Q05DH4 1040 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 UGCGQ16739 394 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 ANKLE1Q8NAG6 615 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 KAT2BQ92831 832 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 SEZ6LQ9BYH1 1024 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-221ENST00000555773 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
SHMT2-221ENST00000555773 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
SHMT2-221ENST00000555773 ZNF202O95125 648 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 EYA4O95677 639 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 SLFN14P0C7P3 912 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 PLCG1P19174 1290 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 STAT6P42226 847 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 PSEN2P49810 448 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 PRKCEQ02156 737 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 MFSD10Q14728 455 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 CXCL17Q6UXB2 119 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 FMR1NBQ8N0W7 255 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-221ENST00000555773 PDILTQ8N807 584 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 CCDC34Q96HJ3 373 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 GLT1D1Q96MS3 346 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 PLIN2Q99541 437 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 LRRC27Q9C0I9 530 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 RNPEPQ9H4A4 650 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 MAGEF1Q9HAY2 307 aa13.92□□□□□ -0.18
SHMT2-221ENST00000555773 A0A087X0B3 334 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 MBD3O95983 291 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 PSMC6P62333 389 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
SHMT2-221ENST00000555773 E2F4Q16254 413 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 ANO5Q75V66 913 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-221ENST00000555773 PIGOQ8TEQ8 1089 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 RAD54LQ92698 747 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 DHX58Q96C10 678 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 TIGD1Q96MW7 591 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
SHMT2-221ENST00000555773 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 E9PMD0 336 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 ZBTB39O15060 712 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 PLA2G4BP0C869 781 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 GNAT1P11488 350 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 LIG1P18858 919 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 MARK3P27448 753 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 RARRES1P49788 294 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 AMPD3Q01432 767 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 PTPN11Q06124 597 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-221ENST00000555773 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
SHMT2-221ENST00000555773 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 XKR9Q5GH70 373 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 SV2BQ7L1I2 683 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 ELOA2Q8IYF1 753 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms