RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SIP14410 1827 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 FAM26DQ5JW98 314 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 FAM160B1Q5W0V3 765 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 SMAP1Q8IYB5 467 aaPredicted RBP15.46■□□□□ 0.07
SNX6-203ENST00000555416 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 HAS1Q92839 578 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 GUCD1Q96NT3 240 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 LLPHQ9BRT6 129 aaKnown RBP15.46■□□□□ 0.07
SNX6-203ENST00000555416 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 SH2B1Q9NRF2 756 aaPredicted RBP15.46■□□□□ 0.07
SNX6-203ENST00000555416 DISC1Q9NRI5 854 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 PCDHA10Q9Y5I2 948 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 SLC4A7Q9Y6M7 1214 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 WDR81Q562E7 1941 aa15.46■□□□□ 0.07
SNX6-203ENST00000555416 CDH23Q9H251 3354 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 IGSF9BQ9UPX0 1349 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 RRN3P2A6NIE6 340 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 EML1O00423 815 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 CCNT1O60563 726 aaKnown RBP15.45■□□□□ 0.06
SNX6-203ENST00000555416 PSAPP07602 524 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 ATP2A2P16615 1042 aaKnown RBP15.45■□□□□ 0.06
SNX6-203ENST00000555416 DEFB103AP81534 67 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 MGAT3Q09327 533 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
SNX6-203ENST00000555416 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 MTHFD1LQ6UB35 978 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 DBF4BQ8NFT6 615 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 TMX3Q96JJ7 454 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 FAM49AQ9H0Q0 323 aaPredicted RBP15.45■□□□□ 0.06
SNX6-203ENST00000555416 SEMA6BQ9H3T3 888 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
SNX6-203ENST00000555416 VAV3Q9UKW4 847 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 COL6A3P12111 3177 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 CHD7Q9P2D1 2997 aa15.45■□□□□ 0.06
SNX6-203ENST00000555416 HBP1O60381 514 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 ARHGEF15O94989 841 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 KLRC1P26715 233 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 SLC26A2P50443 739 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 WDR5P61964 334 aaKnown RBP15.44■□□□□ 0.06
SNX6-203ENST00000555416 PLEKHG4Q58EX7 1191 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 ZNF697Q5TEC3 545 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 CNKSR3Q6P9H4 555 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 C8orf76Q96K31 380 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 MTIF3Q9H2K0 278 aaKnown RBP15.44■□□□□ 0.06
SNX6-203ENST00000555416 NKX2-4Q9H2Z4 354 aa15.44■□□□□ 0.06
SNX6-203ENST00000555416 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 CAND2O75155 1236 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 STBD1O95210 358 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 PARNO95453 639 aaKnown RBP15.43■□□□□ 0.06
SNX6-203ENST00000555416 ACTN1P12814 892 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 GCFC2P16383 781 aaKnown RBP15.43■□□□□ 0.06
SNX6-203ENST00000555416 TMEM62Q0P6H9 643 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 TRIM29Q14134 588 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNX6-203ENST00000555416 MIER3Q7Z3K6 550 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 CKAP2LQ8IYA6 745 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 BRMS1Q9HCU9 246 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 PCDHA2Q9Y5H9 948 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 CDY2AQ9Y6F7 541 aa15.43■□□□□ 0.06
SNX6-203ENST00000555416 MYH9P35579 1960 aaKnown RBP15.43■□□□□ 0.06
SNX6-203ENST00000555416 ST18O60284 1047 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 BAIAP3O94812 1187 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 C22orf31O95567 290 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 GHRP10912 638 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 SFNP31947 248 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 JAK3P52333 1124 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 MRPS6P82932 125 aaKnown RBP15.42■□□□□ 0.06
SNX6-203ENST00000555416 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
SNX6-203ENST00000555416 PRKCEQ02156 737 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 LPIN1Q14693 890 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 GRIN2CQ14957 1233 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 KIAA0319LQ8IZA0 1049 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 BBXQ8WY36 941 aaPredicted RBP15.42■□□□□ 0.06
SNX6-203ENST00000555416 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 CDHR5Q9HBB8 845 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 WRAP73Q9P2S5 460 aaPredicted RBP15.42■□□□□ 0.06
SNX6-203ENST00000555416 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
SNX6-203ENST00000555416 SMIM35A0A1B0GVV1 85 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 ABHD14A-ACY1A0A1B0GW23 586 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 OATP04181 439 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 ZNF484Q5JVG2 852 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 FBXO47Q5MNV8 452 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 HERC6Q8IVU3 1022 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 BANK1Q8NDB2 785 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 CDX2Q99626 313 aaPredicted RBP15.41■□□□□ 0.06
SNX6-203ENST00000555416 SH2D3AQ9BRG2 576 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
SNX6-203ENST00000555416 ZNF576Q9H609 170 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms