RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ZNF862O60290 1169 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 FARP2O94887 1054 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 CYP11B2P19099 503 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 PGK1P00558 417 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 SMPD1P17405 629 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 EDNRBP24530 442 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 TMEM119Q4V9L6 283 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 ZNF296Q8WUU4 475 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 REEP2Q9BRK0 252 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 BRCA2P51587 3418 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 STAM2O75886 525 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 EYA4O95677 639 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 SFNP31947 248 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 CELF3Q5SZQ8 465 aaKnown RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 METTL7BQ6UX53 244 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 TMEM143Q96AN5 459 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 MRPL44Q9H9J2 332 aaKnown RBP11.33□□□□□ -0.6
NEK9-205ENST00000555405 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
NEK9-205ENST00000555405 GSTTP1A0A1W2PQM5 241 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 GCNT3O95395 438 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 GH1P01241 217 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 MYL3P08590 195 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 XRCC6P12956 609 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEK9-205ENST00000555405 MAP2K2P36507 400 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 MFSD14CQ5VZR4 134 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 TAPT1Q6NXT6 567 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 SFR1Q86XK3 245 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 GSDMAQ96QA5 445 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 TRIM5Q9C035 493 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
NEK9-205ENST00000555405 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
NEK9-205ENST00000555405 PRCPP42785 496 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 POLGP54098 1239 aaPredicted RBP11.32□□□□□ -0.6
NEK9-205ENST00000555405 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 OTUD6AQ7L8S5 288 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 ABRAQ8N0Z2 381 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 SPC24Q8NBT2 197 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
NEK9-205ENST00000555405 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ADCY3O60266 1144 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 TGFB3P10600 412 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 MRE11P49959 708 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 STIM1Q13586 685 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 MORN1Q5T089 497 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ABHD15Q6UXT9 468 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 TRIB2Q92519 343 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 APBA2Q99767 749 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 IKZF4Q9H2S9 585 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 RMND1Q9NWS8 449 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 HIP1RO75146 1068 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 RARRES1P49788 294 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 PEX3P56589 373 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 COASYQ13057 564 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FAM160B1Q5W0V3 765 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 OLFML2BQ68BL8 750 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ANO5Q75V66 913 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 NELFBQ8WX92 580 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 LRRC27Q9C0I9 530 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 VTA1Q9NP79 307 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 TEX2Q8IWB9 1127 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 SOCS4Q8WXH5 440 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 SENP7Q9BQF6 1050 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
NEK9-205ENST00000555405 NRBP2Q9NSY0 501 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 NFE2L3Q9Y4A8 694 aa11.31□□□□□ -0.6
NEK9-205ENST00000555405 ADCY6O43306 1168 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms