RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 GADD45BO75293 160 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-215ENST00000554997 F2P00734 622 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 UBE2HP62256 183 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 GRB10Q13322 594 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 PLCB4Q15147 1175 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 UGCGQ16739 394 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 RRAGBQ5VZM2 374 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 OTUD6AQ7L8S5 288 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 ATP8B4Q8TF62 1192 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-215ENST00000554997 MRPS27Q92552 414 aaKnown RBP11.41□□□□□ -0.58
SYNE2-215ENST00000554997 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 PYM1Q9BRP8 204 aaKnown RBP11.41□□□□□ -0.58
SYNE2-215ENST00000554997 KATNAL1Q9BW62 490 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 SEZ6LQ9BYH1 1024 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 ANKEF1Q9NU02 776 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 DNM3Q9UQ16 869 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 HPSEQ9Y251 543 aa11.41□□□□□ -0.58
SYNE2-215ENST00000554997 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 KDM3AQ9Y4C1 1321 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 ZBTB39O15060 712 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 HBP1O60381 514 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 OATP04181 439 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 YWHABP31946 246 aaKnown RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 MCM4P33991 863 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 PSEN2P49810 448 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 PSMC6P62333 389 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 MFSD10Q14728 455 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 KIAA0753Q2KHM9 967 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 TMEM119Q4V9L6 283 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 ANO5Q75V66 913 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 IQUBQ8NA54 791 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 PLIN2Q99541 437 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 DDX19AQ9NUU7 478 aaKnown RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 DBR1Q9UK59 544 aaKnown RBP11.4□□□□□ -0.58
SYNE2-215ENST00000554997 CENPFP49454 3210 aa11.4□□□□□ -0.58
SYNE2-215ENST00000554997 A0A087WWV3 80 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 RRN3P2A6NIE6 340 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 E9PMD0 336 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 POLR2DO15514 142 aaKnown RBP11.39□□□□□ -0.59
SYNE2-215ENST00000554997 CAPN15O75808 1086 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 EYA4O95677 639 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PFKFB1P16118 471 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PLCG1P19174 1290 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 MARK3P27448 753 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 SYKP43405 635 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 NDUFA8P51970 172 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PRKCEQ02156 737 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 TARBP2Q15633 366 aaKnown RBP11.39□□□□□ -0.59
SYNE2-215ENST00000554997 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 ZNF484Q5JVG2 852 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PDILTQ8N807 584 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 C7orf31Q8N865 590 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 FSIP1Q8NA03 581 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 ENGASEQ8NFI3 743 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 RASSF8Q8NHQ8 419 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 ABHD8Q96I13 439 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 CUEDC2Q9H467 287 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 USP25Q9UHP3 1055 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
SYNE2-215ENST00000554997 GRIN2DO15399 1336 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 NRCAMQ92823 1304 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 A0A087X0B3 334 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 A0A1W2PQ45 241 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 A0A1W2PQY0 241 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 ZNF202O95125 648 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 COL6A1P12109 1028 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 INSRRP14616 1297 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 STAT6P42226 847 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 FAM160A1Q05DH4 1040 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 PTPN11Q06124 597 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 E2F4Q16254 413 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 LONRF3Q496Y0 759 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 NAALADL2Q58DX5 795 aa11.38□□□□□ -0.59
SYNE2-215ENST00000554997 TRMT1LQ7Z2T5 733 aaKnown RBP11.38□□□□□ -0.59
SYNE2-215ENST00000554997 KCNK18Q7Z418 384 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms