RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DIS3L2Q8IYB7 885 aaKnown RBP12.42□□□□□ -0.42
SRP54-205ENST00000554803 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 ANKRD20A12PQ8NF67 263 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 NEDD1Q8NHV4 660 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.42□□□□□ -0.42
SRP54-205ENST00000554803 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
SRP54-205ENST00000554803 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 PPP2R2CQ9Y2T4 447 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 C5orf42Q9H799 3197 aa12.42□□□□□ -0.42
SRP54-205ENST00000554803 DNAJC25-GNG10A0A024R161 153 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 BIN1O00499 593 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 B4GALT4O60513 344 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 MYL1P05976 194 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 IL9P15248 144 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 FECHP22830 423 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 CACNA1BQ00975 2339 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 BEX3Q00994 111 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 PNOCQ13519 176 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 ITGA7Q13683 1181 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 BRD3Q15059 726 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 SPATA1Q5VX52 437 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 CEP112Q8N8E3 955 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 TRPV6Q9H1D0 765 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
SRP54-205ENST00000554803 MAN1B1Q9UKM7 699 aa12.41□□□□□ -0.42
SRP54-205ENST00000554803 ZNF536O15090 1300 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
SRP54-205ENST00000554803 VWA5AO00534 786 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 DDAH1O94760 285 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 ZRANB2O95218 330 aaKnown RBP eCLIP12.4□□□□□ -0.42
SRP54-205ENST00000554803 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 ACTN1P12814 892 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 RXRAP19793 462 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 NR1I3Q14994 352 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 ARHGAP29Q52LW3 1261 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 PPFIBP1Q86W92 1011 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
SRP54-205ENST00000554803 IQCDQ96DY2 449 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 TCP11L1Q9NUJ3 509 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 FANCLQ9NW38 375 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 NFE2L3Q9Y4A8 694 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
SRP54-205ENST00000554803 SCN10AQ9Y5Y9 1956 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 ASTN1O14525 1302 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
SRP54-205ENST00000554803 KIF5CO60282 957 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 ATP1A3P13637 1013 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 KCNA5P22460 613 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 MCM3P25205 808 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 KRT2P35908 639 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 PPP1R2P41236 205 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 NOVP48745 357 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
SRP54-205ENST00000554803 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
SRP54-205ENST00000554803 DEFB128Q7Z7B8 93 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 ZNF654Q8IZM8 581 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 MFSD14AQ96MC6 490 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 MTMR4Q9NYA4 1195 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
SRP54-205ENST00000554803 BAZ2BQ9UIF8 2168 aaKnown RBP12.38□□□□□ -0.43
SRP54-205ENST00000554803 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
SRP54-205ENST00000554803 ERLIN1O75477 346 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
SRP54-205ENST00000554803 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms