RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MAMDC2Q7Z304 686 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 LGI4Q8N135 537 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DTX3Q8N9I9 347 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 UHMK1Q8TAS1 419 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PHOSPHO1Q8TCT1 267 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PTPRN2Q92932 1015 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 CLUHP3Q96NS8 147 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 CLIC6Q96NY7 704 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 CDK5RAP1Q96SZ6 601 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 L2HGDHQ9H9P8 463 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 NDOR1Q9UHB4 597 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PLAAQ9Y263 795 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PTPN22Q9Y2R2 807 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 ZDHHC9Q9Y397 364 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PCDHA8Q9Y5H6 950 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DNMBPQ6XZF7 1577 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DIP2BQ9P265 1576 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 C9orf118A6NHY6 69 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 FAM90A27PA6NNH2 459 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KRIT1O00522 736 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KCNK3O14649 394 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KCNQ2O43526 872 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 EFCAB14O75071 495 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 AMY2AP04746 511 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 CYP1A1P04798 512 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 GNAT1P11488 350 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 FAHP16930 419 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 NCLP19338 710 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 AMY2BP19961 511 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 GLRBP48167 497 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 EPHA5P54756 1037 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 GPR85P60893 370 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PFKPQ01813 784 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 ICAM4Q14773 271 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 SKIDA1Q1XH10 827 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KIZQ2M2Z5 673 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DALRD3Q5D0E6 543 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 TRIM61Q5EBN2 209 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 RNF187Q5TA31 235 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 CD276Q5ZPR3 534 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 TRMT10BQ6PF06 316 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KCTD1Q719H9 257 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 OSTM1Q86WC4 334 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DHX37Q8IY37 1157 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 KBTBD2Q8IY47 623 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 NIM1KQ8IY84 436 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 IFNL3Q8IZI9 196 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 STPG3Q8N7X2 389 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 SLC7A14Q8TBB6 771 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 NINJ1Q92982 152 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 TMEM168Q9H0V1 697 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 TMX1Q9H3N1 280 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 SLC52A2Q9HAB3 445 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 NGRNQ9NPE2 291 aaKnown RBP2.17□□□□□ -2.06
PRPF39-208ENST00000554785 SFMBT1Q9UHJ3 866 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 DSEQ9UL01 958 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 PRKAB1Q9Y478 270 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 ZNF536O15090 1300 aa2.17□□□□□ -2.06
PRPF39-208ENST00000554785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-208ENST00000554785 AQP7O14520 342 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 KNG1P01042 644 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 APPP05067 770 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 ZNF20P17024 532 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 TACR2P21452 398 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 MASP1P48740 699 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 NFATC3Q12968 1075 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 SEC23AQ15436 765 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 CDSNQ15517 529 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 SURF1Q15526 300 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 TM4SF20Q53R12 229 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 FSTL4Q6MZW2 842 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 PKN3Q6P5Z2 889 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 GPR155Q7Z3F1 870 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 BRAPQ7Z569 592 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 FAM124AQ86V42 546 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 GSTCDQ8NEC7 633 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 TTLL11Q8NHH1 800 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 PCDH19Q8TAB3 1148 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 FBXO41Q8TF61 875 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 DVL3Q92997 716 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-208ENST00000554785 MFSD3Q96ES6 412 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 LOXL4Q96JB6 756 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 MAGEB10Q96LZ2 347 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-208ENST00000554785 TMEM209Q96SK2 561 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 ZFYVE21Q9BQ24 234 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 MENTQ9BUN1 341 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 PDGFDQ9GZP0 370 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-208ENST00000554785 CD248Q9HCU0 757 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 SLC39A2Q9NP94 309 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 KCND1Q9NSA2 647 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 ZFP69BQ9UJL9 534 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 CBLCQ9ULV8 474 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 PCDHA9Q9Y5H5 950 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 CEP170Q5SW79 1584 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 SPATA31D1Q6ZQQ2 1576 aa2.16□□□□□ -2.06
PRPF39-208ENST00000554785 LAMTOR5O43504 91 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 MAFKO60675 156 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 DNAJC6O75061 913 aa2.15□□□□□ -2.06
PRPF39-208ENST00000554785 FZD7O75084 574 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms