RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 RMND1Q9NWS8 449 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 TSKSQ9UJT2 592 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.16
SHOX2-206ENST00000554685 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.16
SHOX2-206ENST00000554685 ZSWIM8A7E2V4 1837 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 DOCK3Q8IZD9 2030 aa16.02■□□□□ 0.15
SHOX2-206ENST00000554685 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-206ENST00000554685 SEPT4O43236 478 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
SHOX2-206ENST00000554685 PPFIA4O75335 1185 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 YWHABP31946 246 aaKnown RBP16.01■□□□□ 0.15
SHOX2-206ENST00000554685 CPT1AP50416 773 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 PRKCEQ02156 737 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
SHOX2-206ENST00000554685 DPYDQ12882 1025 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 PNOCQ13519 176 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 UGCGQ16739 394 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 TLK2Q86UE8 772 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 TRIML1Q8N9V2 468 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 GLG1Q92896 1179 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 NRBP2Q9NSY0 501 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
SHOX2-206ENST00000554685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 FOXN1O15353 648 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 DYNC1LI2O43237 492 aaPredicted RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 OATP04181 439 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 ELNP15502 786 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 GRK4P32298 578 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 SLC12A3P55017 1021 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 PSMC6P62333 389 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 ASIC1P78348 528 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 DGKDQ16760 1214 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 GRAMD1CQ8IYS0 662 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 SPATA20Q8TB22 786 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 PIGOQ8TEQ8 1089 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 LRRC15Q8TF66 581 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 AFG1LQ8WV93 481 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 STAMQ92783 540 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 MTRQ99707 1265 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 TIPINQ9BVW5 301 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 WRAP73Q9P2S5 460 aaPredicted RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
SHOX2-206ENST00000554685 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
SHOX2-206ENST00000554685 PVALEFA0A1B0GWK0 134 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 MSCO60682 206 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 MMP3P08254 477 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 RARBP10826 455 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 HOXD8P13378 290 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-206ENST00000554685 CYP11B2P19099 503 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 CNGA1P29973 690 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 RARRES1P49788 294 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 CUL4BQ13620 913 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 KCNB1Q14721 858 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 GJC2Q5T442 439 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-206ENST00000554685 UTP14CQ5TAP6 766 aaKnown RBP15.99■□□□□ 0.15
SHOX2-206ENST00000554685 MAP3K21Q5TCX8 1036 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 TRPV1Q8NER1 839 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 ANO10Q9NW15 660 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 ERAP1Q9NZ08 941 aa15.99■□□□□ 0.15
SHOX2-206ENST00000554685 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
SHOX2-206ENST00000554685 MYMKA6NI61 221 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 A6NJR5 290 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 ZNF862O60290 1169 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 ZEB2O60315 1214 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 KPNA6O60684 536 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
SHOX2-206ENST00000554685 LGALS2P05162 132 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
SHOX2-206ENST00000554685 STX1AQ16623 288 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 XKR9Q5GH70 373 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 TMEM63BQ5T3F8 832 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 UNC13DQ70J99 1090 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 CCDC65Q8IXS2 484 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
SHOX2-206ENST00000554685 DDX12PQ92771 950 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 PCYT2Q99447 389 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 BLZF1Q9H2G9 400 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 EXOC1Q9NV70 894 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 LOXHD1Q8IVV2 1947 aa15.98■□□□□ 0.15
SHOX2-206ENST00000554685 ADCY6O43306 1168 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
SHOX2-206ENST00000554685 CAVIN2O95810 425 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 INHAP05111 366 aa15.97■□□□□ 0.15
SHOX2-206ENST00000554685 GUCY2CP25092 1073 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms