RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 LPIN1Q14693 890 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 GRM4Q14833 912 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
VPS33B-204ENST00000554660 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 SAMD3Q8N6K7 520 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 LMAN2LQ9H0V9 348 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 KCNH6Q9H252 994 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 PDRG1Q9NUG6 133 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
VPS33B-204ENST00000554660 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 STXBP3O00186 592 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 RB1P06400 928 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 SYT1P21579 422 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 NDUFV1P49821 464 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 CAMK1Q14012 370 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
VPS33B-204ENST00000554660 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-204ENST00000554660 RIOX1Q9H6W3 641 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 CD207Q9UJ71 328 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
VPS33B-204ENST00000554660 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 STAM2O75886 525 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 DNAJB1P25685 340 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 TCF7P36402 384 aaPredicted RBP13□□□□□ -0.33
VPS33B-204ENST00000554660 PPFIA1Q13136 1202 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 TAF2Q6P1X5 1199 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 ZNF689Q96CS4 500 aaPredicted RBP13□□□□□ -0.33
VPS33B-204ENST00000554660 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 CDY2AQ9Y6F7 541 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
VPS33B-204ENST00000554660 USP34Q70CQ2 3546 aa13□□□□□ -0.33
VPS33B-204ENST00000554660 TECTAO75443 2155 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 ENPP3O14638 875 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
VPS33B-204ENST00000554660 DGKIO75912 1065 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 TRAF1Q13077 416 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 GRIK4Q16099 956 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
VPS33B-204ENST00000554660 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 IER5LQ5T953 404 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 TSHZ1Q6ZSZ6 1077 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 EDAQ92838 391 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 MSLNLQ96KJ4 702 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 JAKMIP1Q96N16 626 aaKnown RBP12.99□□□□□ -0.33
VPS33B-204ENST00000554660 AGO3Q9H9G7 860 aaKnown RBP12.99□□□□□ -0.33
VPS33B-204ENST00000554660 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 PCDHGC5Q9Y5F6 944 aa12.99□□□□□ -0.33
VPS33B-204ENST00000554660 RBM8AQ9Y5S9 174 aaKnown RBP12.99□□□□□ -0.33
VPS33B-204ENST00000554660 TCHHQ07283 1943 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
VPS33B-204ENST00000554660 ITGB1P05556 798 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 TPM3P06753 285 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 CD52P31358 61 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 GATMP50440 423 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 IGBP1P78318 339 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 PTH1RQ03431 593 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 TROAPQ12815 778 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 ADAM15Q13444 863 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 MARCH8Q5T0T0 291 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 PCNX4Q63HM2 1172 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 FAM49AQ9H0Q0 323 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-204ENST00000554660 CLEC1BQ9P126 229 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-204ENST00000554660 MTMR6Q9Y217 621 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
VPS33B-204ENST00000554660 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
VPS33B-204ENST00000554660 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 M0R296 226 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 SLC27A2O14975 620 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 ATP9AO75110 1047 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 GLP2RO95838 553 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 KCNA2P16389 499 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 IBSPP21815 317 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-204ENST00000554660 NRIP1P48552 1158 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 MRPS6P82932 125 aaKnown RBP12.97□□□□□ -0.33
VPS33B-204ENST00000554660 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 TRDNQ13061 729 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 WTAPQ15007 396 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 TRIM67Q6ZTA4 783 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 RBM23Q86U06 439 aaKnown RBP12.97□□□□□ -0.33
VPS33B-204ENST00000554660 RSPH3Q86UC2 560 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 NLRX1Q86UT6 975 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 CMTR2Q8IYT2 770 aaKnown RBP12.97□□□□□ -0.33
VPS33B-204ENST00000554660 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
VPS33B-204ENST00000554660 POF1BQ8WVV4 589 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms