RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OATP04181 439 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PRCPP42785 496 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 CDK8P49336 464 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 CYB5R4Q7L1T6 521 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 RAB44Q7Z6P3 723 aaPredicted RBP15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PDIK1LQ8N165 341 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 TRIM49BA6NDI0 452 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 ESRRAP11474 423 aaPredicted RBP15.01□□□□□ -0.01
VTI1B-204ENST00000554659 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 KCTD6Q8NC69 237 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
VTI1B-204ENST00000554659 MID2Q9UJV3 735 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PLS3P13797 630 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 DYNLT1P63172 113 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.01□□□□□ -0.01
VTI1B-204ENST00000554659 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 MED14O60244 1454 aa15.01□□□□□ -0.01
VTI1B-204ENST00000554659 PALM3A6NDB9 673 aaPredicted RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 LMNAP02545 664 aaKnown RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 KRT80Q6KB66 452 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ELAC2Q9BQ52 826 aaKnown RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 TTI1O43156 1089 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ARL4AP40617 200 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 KCNJ6P48051 423 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 USP14P54578 494 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 TBC1D1Q86TI0 1168 aaPredicted RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 LY9Q9HBG7 655 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 CHUKO15111 745 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ACSL3O95573 720 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 NR1H3Q13133 447 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 SPARCL1Q14515 664 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 PYROXD1Q8WU10 500 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 OSBPL9Q96SU4 736 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 BHMT2Q9H2M3 363 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ATP5HO75947 161 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 EEF1B2P24534 225 aaKnown RBP15□□□□□ -0.01
VTI1B-204ENST00000554659 SURF1Q15526 300 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 CALN1Q9BXU9 219 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 PITPNM3Q9BZ71 974 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 ZNF408Q9H9D4 720 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 DNAJC12Q9UKB3 198 aa15□□□□□ -0.01
VTI1B-204ENST00000554659 SYNJ2BP-COX16A0A087WUM0 186 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 ZBBXA8MT70 800 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 CAV1Q03135 178 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 LLGL1Q15334 1064 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 ALX1Q15699 326 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 NCAPG2Q86XI2 1143 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 NLGN1Q8N2Q7 840 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 COX16Q9P0S2 106 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 A0A1W2PQC6 194 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 BBS9Q3SYG4 887 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 TLK1Q9UKI8 766 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 TOM1L1O75674 476 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 CCND2P30279 289 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 RUBCNQ92622 972 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 RAD54LQ92698 747 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 KIF2CQ99661 725 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 TARSL2A2RTX5 802 aaKnown RBP14.99□□□□□ -0.01
VTI1B-204ENST00000554659 ZNF449Q6P9G9 518 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 RNF207Q6ZRF8 634 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 KRT82Q9NSB4 513 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 LCMT1Q9UIC8 334 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 SNX24Q9Y343 169 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 TET3O43151 1660 aa14.99□□□□□ -0.01
VTI1B-204ENST00000554659 GDF11O95390 407 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 SESTD1Q86VW0 696 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 SERPINI1Q99574 410 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 PRPSAP2O60256 369 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 TJP3O95049 919 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 ICE2Q659A1 982 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 SLC38A10Q9HBR0 1119 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 INTUQ9ULD6 942 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 PACSIN2Q9UNF0 486 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 ORC6Q9Y5N6 252 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 MAP3K4Q9Y6R4 1608 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 INO80B-WBP1J3KQ70 363 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 CASP1P29466 404 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 TFAMQ00059 246 aaKnown RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 IFRD2Q12894 506 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 DNAAF3Q8N9W5 541 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 CCNYQ8ND76 341 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 INO80BQ9C086 356 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 MRPS25P82663 173 aaKnown RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 GFPT1Q06210 699 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 MYLK4Q86YV6 388 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 FAM149B1Q96BN6 582 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 UBN2Q6ZU65 1347 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 GMNCA6NCL1 334 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms