RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GTPBP4Q9BZE4 634 aaKnown RBP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
ATXN3-227ENST00000554491 PPLO60437 1756 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 NAIPQ13075 1403 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 ATP10DQ9P241 1426 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 SPATA31A5Q5VU36 1347 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 SPATA31A7Q8IWB4 1347 aa5.46□□□□□ -1.54
ATXN3-227ENST00000554491 LRRC37A3O60309 1634 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 ARHGEF10O15013 1369 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 AKAP12Q02952 1782 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 LETM1O95202 739 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 ZBTB7AO95365 584 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 ITGB3P05106 788 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 MAGEA10P43363 369 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 COL9A2Q14055 689 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 FAM50AQ14320 339 aaKnown RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 TSHZ1Q6ZSZ6 1077 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 OTUD6BQ8N6M0 293 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 C19orf47Q8N9M1 422 aaKnown RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 PLEKHO2Q8TD55 490 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 DPF3Q92784 378 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 RCC1LQ96I51 464 aaKnown RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 IPO9Q96P70 1041 aaKnown RBP5.45□□□□□ -1.54
ATXN3-227ENST00000554491 GPRC5CQ9NQ84 441 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 CLEC1BQ9P126 229 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 APEX2Q9UBZ4 518 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 MYRFQ9Y2G1 1151 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 SLC12A7Q9Y666 1083 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 PAPPAQ13219 1627 aa5.45□□□□□ -1.54
ATXN3-227ENST00000554491 FAM83GA6ND36 823 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 PLS3P13797 630 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 GRB10Q13322 594 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 QSER1Q2KHR3 1735 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-227ENST00000554491 LINC00482Q8N8I6 264 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 ADAMTS17Q8TE56 1095 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 SMPD4Q9NXE4 827 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 TERF2IPQ9NYB0 399 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-227ENST00000554491 RAI14Q9P0K7 980 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 ANKRD50Q9ULJ7 1429 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 SUGT1Q9Y2Z0 365 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 NRXN1Q9ULB1 1477 aa5.44□□□□□ -1.54
ATXN3-227ENST00000554491 SBNO1A3KN83 1393 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 TECPR2O15040 1411 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 VGLL3A8MV65 326 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 NPHS1O60500 1241 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 KCNH1O95259 989 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 CYP2C8P10632 490 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 SSR1P43307 286 aaKnown RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 RBM25P49756 843 aaKnown RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 TERF1P54274 439 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 ADAM17P78536 824 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 CCDC96Q2M329 555 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 SPTY2D1Q68D10 685 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 KIAA1211LQ6NV74 962 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 RINLQ6ZS11 566 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 TTLL7Q6ZT98 887 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 STK32CQ86UX6 486 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 ZNF654Q8IZM8 581 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 C11orf84Q9BUA3 381 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 PDGFDQ9GZP0 370 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 RBM28Q9NW13 759 aaKnown RBP5.43□□□□□ -1.54
ATXN3-227ENST00000554491 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 MARCH2Q9P0N8 246 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 PALD1Q9ULE6 856 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
ATXN3-227ENST00000554491 ADCY9O60503 1353 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 TUBGCP6Q96RT7 1819 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 SGSM2O43147 1006 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 RECKO95980 971 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 THBS2P35442 1172 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 SCRN1Q12765 414 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 RGL3Q3MIN7 710 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 TBC1D10BQ4KMP7 808 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-227ENST00000554491 METTL16Q86W50 562 aaKnown RBP5.42□□□□□ -1.54
ATXN3-227ENST00000554491 FAM9BQ8IZU0 186 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 COPS5Q92905 334 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 MKL1Q969V6 931 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 GPRASP2Q96D09 838 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 SHDQ96IW2 340 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 LGR4Q9BXB1 951 aa5.42□□□□□ -1.54
ATXN3-227ENST00000554491 ARHGEF28Q8N1W1 1705 aaKnown RBP5.42□□□□□ -1.54
ATXN3-227ENST00000554491 OVOS2A0A0G2JMS6 1433 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 OVOS2A0A0J9YW53 1432 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 OVOS2Q6IE36 1432 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 LMO7Q8WWI1 1683 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 TRBV23OR9-2A0A075B6M9 112 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 GOLIM4O00461 696 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-227ENST00000554491 THBDP07204 575 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 TNFRSF1AP19438 455 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 CALRP27797 417 aaKnown RBP5.41□□□□□ -1.54
ATXN3-227ENST00000554491 SATB1Q01826 763 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 MAP2K1Q02750 393 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-227ENST00000554491 ZKSCAN8Q15776 578 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms