RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ETFBP38117 255 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 GPR85P60893 370 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 IL13RA1P78552 427 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 HGFACQ04756 655 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 FXNQ16595 210 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 STYK1Q6J9G0 422 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 CXXC5Q7LFL8 322 aaKnown RBP3.99□□□□□ -1.77
SRP54-204ENST00000553923 OSBP2Q969R2 916 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 CLIP3Q96DZ5 547 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 WNK4Q96J92 1243 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 CRAMP1Q96RY5 1269 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 PRRX2Q99811 253 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 KIAA1683Q9H0B3 1180 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 C12orf65Q9H3J6 166 aaKnown RBP3.99□□□□□ -1.77
SRP54-204ENST00000553923 AGO3Q9H9G7 860 aaKnown RBP3.99□□□□□ -1.77
SRP54-204ENST00000553923 PUF60Q9UHX1 559 aaKnown RBP3.99□□□□□ -1.77
SRP54-204ENST00000553923 INPP5FQ9Y2H2 1132 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 PMS2P1A4D2B8 440 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 PEX11BO96011 259 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 RANGAP1P46060 587 aaPredicted RBP3.98□□□□□ -1.77
SRP54-204ENST00000553923 GRM7Q14831 915 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 BTBD8Q5XKL5 378 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 EEPD1Q7L9B9 569 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 SCUBE1Q8IWY4 988 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.98□□□□□ -1.77
SRP54-204ENST00000553923 NELFAQ9H3P2 528 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 WDR26Q9H7D7 661 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 IPPKQ9H8X2 491 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 SLC2A4RGQ9NR83 387 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 BTBD7Q9P203 1132 aa3.98□□□□□ -1.77
SRP54-204ENST00000553923 ASXL2Q76L83 1435 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 FAM47E-STBD1D6RA91 191 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 FOXN1O15353 648 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 MPIG6BO95866 241 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 FGFR1P11362 822 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 PDE6AP16499 860 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 PTPN1P18031 435 aaKnown RBP3.97□□□□□ -1.77
SRP54-204ENST00000553923 KCNQ1P51787 676 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 SLC25A3Q00325 362 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 PCOLCEQ15113 449 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 WDR72Q3MJ13 1102 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 DPY19L2P1Q6NXN4 242 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 ADGRE4PQ86SQ3 457 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 IFNL3Q8IZI9 196 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 SGSM3Q96HU1 749 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 ARHGEF4Q9NR80 690 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 GALNT8Q9NY28 637 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 GPRC5BQ9NZH0 403 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 FBXO10Q9UK96 956 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 GIT1Q9Y2X7 761 aa3.97□□□□□ -1.77
SRP54-204ENST00000553923 AGRPO00253 132 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 WNT9AO14904 365 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 PPFIA2O75334 1257 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 HMGCRP04035 888 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 AMY2AP04746 511 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 AMY2BP19961 511 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 FBLP22087 321 aaKnown RBP3.96□□□□□ -1.78
SRP54-204ENST00000553923 PTGS1P23219 599 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 ADRA1BP35368 520 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 HSP90AA2PQ14568 343 aaPredicted RBP3.96□□□□□ -1.78
SRP54-204ENST00000553923 KANK2Q63ZY3 851 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 TMEM200BQ69YZ2 307 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 SGMS1Q86VZ5 419 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 RPUSD2Q8IZ73 545 aaKnown RBP3.96□□□□□ -1.78
SRP54-204ENST00000553923 AARSD1Q9BTE6 412 aaKnown RBP3.96□□□□□ -1.78
SRP54-204ENST00000553923 AMNQ9BXJ7 453 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 OR10A2Q9H208 303 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 CDC42EP3Q9UKI2 254 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 SRPK3Q9UPE1 567 aa3.96□□□□□ -1.78
SRP54-204ENST00000553923 BLACEA4D250 179 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 MAN2B1O00754 1011 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 PRODHO43272 600 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 RAMP2O60895 175 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 C4BPAP04003 597 aaKnown RBP3.95□□□□□ -1.78
SRP54-204ENST00000553923 PABPC1P11940 636 aaKnown RBP3.95□□□□□ -1.78
SRP54-204ENST00000553923 PROZP22891 400 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 AOAHP28039 575 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 MC4RP32245 332 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 ADCY8P40145 1251 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 MRE11P49959 708 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 RRP1BQ14684 758 aaKnown RBP3.95□□□□□ -1.78
SRP54-204ENST00000553923 GPR19Q15760 415 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 LRCH2Q5VUJ6 765 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 FILIP1Q7Z7B0 1213 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 NLGN4XQ8N0W4 816 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 THEMISQ8N1K5 641 aaPredicted RBP3.95□□□□□ -1.78
SRP54-204ENST00000553923 BTBD2Q9BX70 525 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 INCENPQ9NQS7 918 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 PARPBPQ9NWS1 579 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 ARHGAP28Q9P2N2 729 aa3.95□□□□□ -1.78
SRP54-204ENST00000553923 A0A0G2JNJ9 132 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 SLC26A4O43511 780 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 SSBP05455 408 aaKnown RBP eCLIP3.94□□□□□ -1.78
SRP54-204ENST00000553923 IL12RB1P42701 662 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 CD83Q01151 205 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 ARHGAP36Q6ZRI8 547 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 D2HGDHQ8N465 521 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 CELF2-AS1Q8N7Q2 184 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 TTPALQ9BTX7 342 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 RIC8BQ9NVN3 520 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms