RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 GRID2IPA4D2P6 1211 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 OPLAHO14841 1288 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 TRIM66O15016 1216 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 AFPP02771 609 aaKnown RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 MMP10P09238 476 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 EPHB4P54760 987 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 DNAJC21Q5F1R6 531 aaKnown RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 TMEM179Q6ZVK1 233 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 PODNQ7Z5L7 613 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 ZC3H3Q8IXZ2 948 aaKnown RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 KRT12Q99456 494 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 TDRD3Q9H7E2 651 aaKnown RBP15.98■□□□□ 0.15
ACTN1-211ENST00000553882 RSPH14Q9UHP6 348 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 NFU1Q9UMS0 254 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
ACTN1-211ENST00000553882 SIPA1L1O43166 1804 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 PON1P27169 355 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 SREBF1P36956 1147 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 CARSP49589 748 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 TATDN1Q6P1N9 297 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 GJB7Q6PEY0 223 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 FAM76AQ8TAV0 307 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 RABEP2Q9H5N1 569 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 EPB41L5Q9HCM4 733 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 TSKSQ9UJT2 592 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 TRAF3IP3Q9Y228 551 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 PCDHGC5Q9Y5F6 944 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 ANKRD65E5RJM6 399 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 ZBTB39O15060 712 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 HEXIM1O94992 359 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 IVLP07476 585 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 NOP2P46087 812 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 UBXN2AP68543 259 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 CTTNQ14247 550 aaKnown RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 Q4G0T1 1027 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 MEI1Q5TIA1 1274 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 MOXD1Q6UVY6 613 aa15.97■□□□□ 0.15
ACTN1-211ENST00000553882 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-211ENST00000553882 ASTN1O14525 1302 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 NR3C1P04150 777 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 FAM153BP0C7A2 387 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 TRADDQ15628 312 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 FAM153CQ494X1 144 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 C10orf67Q8IYJ2 551 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 EIF2AK1Q9BQI3 630 aaKnown RBP15.96■□□□□ 0.15
ACTN1-211ENST00000553882 FAM153AQ9UHL3 310 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 VAV3Q9UKW4 847 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 RABGAP1Q9Y3P9 1069 aa15.96■□□□□ 0.15
ACTN1-211ENST00000553882 MYO1CO00159 1063 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 KCNK3O14649 394 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 ECE2O60344 883 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 BMP3P12645 472 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 RRP1BQ14684 758 aaKnown RBP15.96■□□□□ 0.14
ACTN1-211ENST00000553882 DACT2Q5SW24 774 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 TTC19Q6DKK2 380 aaPredicted RBP15.96■□□□□ 0.14
ACTN1-211ENST00000553882 DPY19L2P1Q6NXN4 242 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 EPM2AIP1Q7L775 607 aaPredicted RBP15.96■□□□□ 0.14
ACTN1-211ENST00000553882 FRMD5Q7Z6J6 570 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 KSR1Q8IVT5 923 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 KLHL7Q8IXQ5 586 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 IDI2Q9BXS1 227 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 GCNT4Q9P109 453 aa15.96■□□□□ 0.14
ACTN1-211ENST00000553882 RRP15Q9Y3B9 282 aaKnown RBP15.96■□□□□ 0.14
ACTN1-211ENST00000553882 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 TBX3O15119 743 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 CFBP00751 764 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 EMBQ6PCB8 327 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 SRLQ86TD4 932 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 TPH2Q8IWU9 490 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 NLGN1Q8N2Q7 840 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-211ENST00000553882 RUFY1Q96T51 708 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 NRXN2Q9P2S2 1712 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 PDXKO00764 312 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 CALUO43852 315 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-211ENST00000553882 KRT14P02533 472 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 PDE6BP35913 854 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 ECE1P42892 770 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 ZC2HC1CQ53FD0 456 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-211ENST00000553882 FAM20AQ96MK3 541 aa15.95■□□□□ 0.14
ACTN1-211ENST00000553882 RPS6KA5O75582 802 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 EPB41P11171 864 aaKnown RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 STRIP1Q5VSL9 837 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 ALKBH5Q6P6C2 394 aaKnown RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 IFT20Q8IY31 132 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 SLC35C1Q96A29 364 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 ARL8AQ96BM9 186 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 GMCL1Q96IK5 515 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 CSRNP1Q96S65 589 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms