RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
PSEN1-209ENST00000553855 FRMPD3Q5JV73 1810 aa9.46□□□□□ -0.9
PSEN1-209ENST00000553855 MCM3APO60318 1980 aa9.46□□□□□ -0.9
PSEN1-209ENST00000553855 CENPFP49454 3210 aa9.46□□□□□ -0.9
PSEN1-209ENST00000553855 LRRC37A2A6NM11 1700 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-209ENST00000553855 CYP3A4P08684 503 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 ITGB5P18084 799 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 KRT2P35908 639 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-209ENST00000553855 CDK7P50613 346 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 USP11P51784 963 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 SP2Q02086 613 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 HSDL1Q3SXM5 330 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 DAGLBQ8NCG7 672 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 GLG1Q92896 1179 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 ZNF577Q9BSK1 485 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 BACH2Q9BYV9 841 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 TBC1D22BQ9NU19 505 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 SLC9A2Q9UBY0 812 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 KCNJ14Q9UNX9 436 aa9.45□□□□□ -0.9
PSEN1-209ENST00000553855 LCTP09848 1927 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 A0A1W2PPC1 479 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 CARNS1A5YM72 827 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 H3BRB1 525 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 MEIS1O00470 390 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 KIAA0355O15063 1070 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 LARGE1O95461 756 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 F2P00734 622 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 TIMP1P01033 207 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 LGALS2P05162 132 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 ZNF286BP0CG31 522 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 TCF7P36402 384 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-209ENST00000553855 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 PPIGQ13427 754 aaKnown RBP eCLIP9.44□□□□□ -0.9
PSEN1-209ENST00000553855 BFSP2Q13515 415 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 PTGISQ16647 500 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 PRR16Q569H4 304 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 FAM160B1Q5W0V3 765 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 FAM126BQ8IXS8 530 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 SLC43A3Q8NBI5 491 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 NSUN7Q8NE18 718 aaKnown RBP9.44□□□□□ -0.9
PSEN1-209ENST00000553855 TBCKQ8TEA7 893 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 C8orf76Q96K31 380 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 GPR20Q99678 358 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 MTIF3Q9H2K0 278 aaKnown RBP9.44□□□□□ -0.9
PSEN1-209ENST00000553855 HIPK3Q9H422 1215 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 SMARCAD1Q9H4L7 1026 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 TUT1Q9H6E5 874 aaKnown RBP9.44□□□□□ -0.9
PSEN1-209ENST00000553855 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 NFASCO94856 1347 aa9.44□□□□□ -0.9
PSEN1-209ENST00000553855 C17orf102A2RUQ5 167 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 DDX39AO00148 427 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 IPO5O00410 1097 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 BACH1O14867 736 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 ATP9AO75110 1047 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 BAG4O95429 457 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 CTDNEP1O95476 244 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 ARP10275 920 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 KCNA2P16389 499 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 JUNDP17535 347 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 BMP8BP34820 402 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 KRT76Q01546 638 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 FPGSQ05932 587 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 PTPRNQ16849 979 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 LETM2Q2VYF4 491 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 NEK8Q86SG6 692 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 BADQ92934 168 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 THAP11Q96EK4 314 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 AIFM3Q96NN9 605 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 GDF15Q99988 308 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 TEKT3Q9BXF9 490 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 TRPV6Q9H1D0 765 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 AGO4Q9HCK5 861 aaKnown RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 ERAP1Q9NZ08 941 aa9.43□□□□□ -0.9
PSEN1-209ENST00000553855 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-209ENST00000553855 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 FAM86B1E9PN63 330 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 B4GALT4O60513 344 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 JAK2O60674 1132 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 GAS7O60861 476 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 NR1I2O75469 434 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 CD4P01730 458 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 MMP1P03956 469 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 PSAPP07602 524 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 FAM86B2P0C5J1 330 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 HOXD8P13378 290 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-209ENST00000553855 CIITAP33076 1130 aa9.42□□□□□ -0.9
PSEN1-209ENST00000553855 ACTR2P61160 394 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms