RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 NBR1Q14596 966 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 ZNF174Q15697 407 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 UGCGQ16739 394 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 MARCH8Q5T0T0 291 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 LRRC8DQ7L1W4 858 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
TMEM253-202ENST00000553744 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
TMEM253-202ENST00000553744 CAND2O75155 1236 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 OATP04181 439 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 RFC2P35250 354 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 TOB1P50616 345 aaPredicted RBP13.36□□□□□ -0.27
TMEM253-202ENST00000553744 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 PSRC1Q6PGN9 363 aaPredicted RBP13.36□□□□□ -0.27
TMEM253-202ENST00000553744 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 TRAPPC12Q8WVT3 735 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
TMEM253-202ENST00000553744 IL23AQ9NPF7 189 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 PCDHA12Q9UN75 941 aa13.36□□□□□ -0.27
TMEM253-202ENST00000553744 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 PARNO95453 639 aaKnown RBP13.35□□□□□ -0.27
TMEM253-202ENST00000553744 PFKMP08237 780 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 THPOP40225 353 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 TXKP42681 527 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 EPHA7Q15375 998 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 TRAF7Q6Q0C0 670 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 C16orf59Q7L2K0 433 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 RPAINQ86UA6 219 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
TMEM253-202ENST00000553744 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 VWCEQ96DN2 955 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMEM253-202ENST00000553744 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
TMEM253-202ENST00000553744 TRIP12Q14669 1992 aaPredicted RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 ACRP10323 421 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 SYT1P21579 422 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 PSMC5P62195 406 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 SHHQ15465 462 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 XKR3Q5GH77 459 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 LXNQ9BS40 222 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
TMEM253-202ENST00000553744 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
TMEM253-202ENST00000553744 SMIM35A0A1B0GVV1 85 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 POTEMA6NI47 508 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 STBD1O95210 358 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 C22orf31O95567 290 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 CTSHP09668 335 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 RSPH10BP0C881 870 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 KLRC1P26715 233 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 MBTPS1Q14703 1052 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 GPNMBQ14956 572 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 DNAJB3Q8WWF6 145 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 RGL1Q9NZL6 768 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
TMEM253-202ENST00000553744 WDR81Q562E7 1941 aa13.33□□□□□ -0.28
TMEM253-202ENST00000553744 MYH9P35579 1960 aaKnown RBP13.32□□□□□ -0.28
TMEM253-202ENST00000553744 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 LAD1O00515 517 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 NBNO60934 754 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 FGBP02675 491 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 CXCL10P02778 98 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 MGAT3Q09327 533 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 PTGDRQ13258 359 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 TARBP2Q15633 366 aaKnown RBP13.32□□□□□ -0.28
TMEM253-202ENST00000553744 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 FAM26DQ5JW98 314 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 ANO5Q75V66 913 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms