RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 UCHL3P15374 230 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPS15P42566 896 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 EDRF1Q3B7T1 1238 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 ARHGAP27Q6ZUM4 889 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 SIAH1Q8IUQ4 282 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 USP38Q8NB14 1042 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 CYP2W1Q8TAV3 490 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 RUSC1Q9BVN2 902 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 CYP3A7-CYP3A51PA0A087WV96 503 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCNK3O14649 394 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 OPLAHO14841 1288 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 CETN3O15182 167 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 GDF11O95390 407 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 CYP3A7P24462 503 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 PON1P27169 355 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 JAG1P78504 1218 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 PPARDQ03181 441 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPHA7Q15375 998 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLFN13Q68D06 897 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 SH3BP5LQ7L8J4 393 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 IFT20Q8IY31 132 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 IQCKQ8N0W5 287 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 LRRC57Q8N9N7 239 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 CRAMP1Q96RY5 1269 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 COA1Q9GZY4 146 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 NEUROG2Q9H2A3 272 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 TMEM59LQ9UK28 342 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 NENFQ9UMX5 172 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 PITPNM2Q9BZ72 1349 aa7.6□□□□□ -1.19
LINC-ROR-201ENST00000553704 EML1O00423 815 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 CLIC2O15247 247 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 KIF4AO95239 1232 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 HOXA7P31268 230 aaPredicted RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 HOXA13P31271 388 aaPredicted RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 MAGEA9P43362 315 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SKOR1P84550 965 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 PAK2Q13177 524 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 NNTQ13423 1086 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 GLE1Q53GS7 698 aaKnown RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 ALS2CLQ60I27 953 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 DDX42Q86XP3 938 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 BCAS4Q8TDM0 211 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 RUFY1Q96T51 708 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 ARMCX3Q9UH62 379 aaPredicted RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 VAV3Q9UKW4 847 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 TRAF3IP3Q9Y228 551 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SFI1A8K8P3 1242 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 OPA1O60313 960 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 AFPP02771 609 aaKnown RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 NR3C1P04150 777 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 HLA-DOAP06340 250 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 USP11P51784 963 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 JAM2P57087 298 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 KNOP1Q1ED39 458 aaKnown RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 TCERG1LQ5VWI1 586 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 PPP4R3CPQ6ZMV5 832 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 KSR1Q8IVT5 923 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SP8Q8IXZ3 490 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SYT2Q8N9I0 419 aaPredicted RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC35C1Q96A29 364 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 SPAG5Q96R06 1193 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 AP1M1Q9BXS5 423 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 BHMT2Q9H2M3 363 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 RGL1Q9NZL6 768 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 GCNT4Q9P109 453 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 RNF14Q9UBS8 474 aa7.59□□□□□ -1.19
LINC-ROR-201ENST00000553704 IGSF9BQ9UPX0 1349 aa7.59□□□□□ -1.2
LINC-ROR-201ENST00000553704 KLRG2A4D1S0 409 aaPredicted RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZBTB39O15060 712 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 MSH4O15457 936 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 ITGA4P13612 1032 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 RPA1P27694 616 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 CRKP46108 304 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 GUCY1A3Q02108 690 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 COG2Q14746 738 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 UAP1Q16222 522 aaPredicted RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 EXOC3L4Q17RC7 722 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 CFAP58Q5T655 872 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 FRMD5Q7Z6J6 570 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 MREGQ8N565 214 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 OR2W6PQ8NHA6 318 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 LNX1Q8TBB1 728 aaPredicted RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 DCAF4Q8WV16 495 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 TEKT1Q969V4 418 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 DDX47Q9H0S4 455 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 DBNDD1Q9H9R9 158 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 LRRC4CQ9HCJ2 640 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 LUC7LQ9NQ29 371 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 FAM198AQ9UFP1 575 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 NOC2LQ9Y3T9 749 aaKnown RBP7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 BTNL10A8MVZ5 291 aa7.58□□□□□ -1.2
LINC-ROR-201ENST00000553704 DDX3XO00571 662 aaKnown RBP eCLIP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms