RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CYFIP1Q7L576 1253 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 TOP1MTQ969P6 601 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 SAMD11Q96NU1 681 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 GPR20Q99678 358 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 RTEL1Q9NZ71 1219 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 RCOR1Q9UKL0 485 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 DEXIO95424 95 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 XBP1P17861 261 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 CDC27P30260 824 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 TMEM31Q5JXX7 168 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 GAS2L3Q86XJ1 694 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 FANCBQ8NB91 859 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 KHSRPQ92945 711 aaKnown RBP eCLIP18.11■□□□□ 0.49
ACTN1-209ENST00000553659 MRPL38Q96DV4 380 aaKnown RBP18.11■□□□□ 0.49
ACTN1-209ENST00000553659 RNF26Q9BY78 433 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-209ENST00000553659 OSBPL7Q9BZF2 842 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 TSPY26PQ9H489 355 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 SETD4Q9NVD3 440 aa18.11■□□□□ 0.49
ACTN1-209ENST00000553659 ARIH1Q9Y4X5 557 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-209ENST00000553659 SYCE3A1L190 88 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 YEATS4O95619 227 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 ADAM17P78536 824 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
ACTN1-209ENST00000553659 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
ACTN1-209ENST00000553659 PTPROQ16827 1216 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 FAM26DQ5JW98 314 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-209ENST00000553659 KCNG4Q8TDN1 519 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 YME1L1Q96TA2 773 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 MAP3K14Q99558 947 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 CD320Q9NPF0 282 aa18.1■□□□□ 0.49
ACTN1-209ENST00000553659 FAM217BQ9NTX9 383 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-209ENST00000553659 ZNF215Q9UL58 517 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-209ENST00000553659 COL4A6Q14031 1691 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-209ENST00000553659 PI4K2BG5E9Z4 385 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 H3BNC9 293 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 PIK3CDO00329 1044 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 GPR37L1O60883 481 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 UPP2O95045 317 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 CTSHP09668 335 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 KCNA5P22460 613 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-209ENST00000553659 PCNX4Q63HM2 1172 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 XRRA1Q6P2D8 792 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 FAM178BQ8IXR5 827 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 APBB2Q92870 758 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 CUL5Q93034 780 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 SPZ1Q9BXG8 430 aa18.09■□□□□ 0.49
ACTN1-209ENST00000553659 GPM6BQ13491 265 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.48
ACTN1-209ENST00000553659 UTP14CQ5TAP6 766 aaKnown RBP18.08■□□□□ 0.48
ACTN1-209ENST00000553659 USP17L6PQ6QN14 398 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 NLRX1Q86UT6 975 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 TRIM50Q86XT4 487 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 TMEM192Q8IY95 271 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 GIMAP8Q8ND71 665 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-209ENST00000553659 BICD2Q8TD16 824 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 LMBR1Q8WVP7 490 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.48
ACTN1-209ENST00000553659 SLC26A6Q9BXS9 759 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 TFIP11Q9UBB9 837 aaKnown RBP18.08■□□□□ 0.48
ACTN1-209ENST00000553659 HCN4Q9Y3Q4 1203 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.48
ACTN1-209ENST00000553659 NRCAMQ92823 1304 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 MEIS2O14770 477 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 DTNBO60941 627 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 KIF5BP33176 963 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 ARHGAP4P98171 946 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 PUS10Q3MIT2 529 aaKnown RBP18.07■□□□□ 0.48
ACTN1-209ENST00000553659 TIGD5Q53EQ6 642 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
ACTN1-209ENST00000553659 IFIH1Q9BYX4 1025 aaKnown RBP18.07■□□□□ 0.48
ACTN1-209ENST00000553659 C11orf16Q9NQ32 467 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 ATG2AQ2TAZ0 1938 aa18.07■□□□□ 0.48
ACTN1-209ENST00000553659 LOXHD1Q8IVV2 1947 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 GRXCR2A6NFK2 248 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 CHRNA1P02708 482 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 IL9P15248 144 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 RXRAP19793 462 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 GNAQP50148 359 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 FOSBP53539 338 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 GUCY1B3Q02153 619 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 SP4Q02446 784 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 CCDC173Q0VFZ6 552 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-209ENST00000553659 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 GJD3Q8N144 294 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 BANK1Q8NDB2 785 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 NEK9Q8TD19 979 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 USP28Q96RU2 1077 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 LZTS2Q9BRK4 669 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 MYL10Q9BUA6 226 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 NUP62CLQ9H1M0 184 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms