RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FAM163BP0C2L3 166 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 ACADSP16219 412 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 C10orf76Q5T2E6 689 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 IRGCQ6NXR0 463 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CEP85Q6P2H3 762 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 TESK2Q96S53 571 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CCDC85CA6NKD9 419 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 MTRF1O75570 445 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 BCRP11274 1271 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 RPL13P26373 211 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 GPR162Q16538 588 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 MDH1BQ5I0G3 518 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 KRT80Q6KB66 452 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 SARM1Q6SZW1 724 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 SEPT1Q8WYJ6 367 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CFAP36Q96G28 342 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 LRRC1Q9BTT6 524 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PASKQ96RG2 1323 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 VAV1P15498 845 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 SOX5P35711 763 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CDR2Q01850 454 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CYP27A1Q02318 531 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 CEP55Q53EZ4 464 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 TWF2Q6IBS0 349 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM227BQ96M60 508 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 KIAA1586Q9HCI6 787 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 MBIPQ9NS73 344 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 FARSBQ9NSD9 589 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PARVAQ9NVD7 372 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 SLC8A2Q9UPR5 921 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PABPN1LA6NDY0 278 aaKnown RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 DNM1LO00429 736 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 GABBR2O75899 941 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 ESRRBO95718 433 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 USP37Q86T82 979 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 OSBPL5Q9H0X9 879 aaPredicted RBP9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
GTF2A1-203ENST00000553612 GOLGA8SH3BPF8 625 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 TNPO2O14787 897 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 ARHGEF9O43307 516 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 ITGA2BP08514 1039 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 PPP4R4Q6NUP7 873 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 CATIPQ7Z7H3 387 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 AP1M1Q9BXS5 423 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 SAMSN1Q9NSI8 373 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 STMN3Q9NZ72 180 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 NCK2O43639 380 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 USP12O75317 370 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 IZUMO2Q6UXV1 221 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 C8orf48Q96LL4 319 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 STK33Q9BYT3 514 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 LEMD3Q9Y2U8 911 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 MCF2P10911 925 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 TCP1P17987 556 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 EEF1B2P24534 225 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 METTL21CQ5VZV1 264 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 CCNI2Q6ZMN8 369 aaPredicted RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 SAMD14Q8IZD0 417 aaPredicted RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 SLC22A8Q8TCC7 542 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 RIOK1Q9BRS2 568 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 MKNK1Q9BUB5 465 aa9.65□□□□□ -0.86
GTF2A1-203ENST00000553612 CYP27B1O15528 508 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 FTCDO95954 541 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 SARSP49591 514 aaKnown RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 B3GNT6Q6ZMB0 384 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 TOR1AIP2Q8NFQ8 470 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 DPF2Q92785 391 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 CHN1P15882 459 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT15P19012 456 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 CENPAP49450 140 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 LMNB2Q03252 620 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 ITGADQ13349 1161 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 MAPK11Q15759 364 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 RBM44Q6ZP01 1051 aaKnown RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 MCF2L2Q86YR7 1114 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 CNBD2Q96M20 576 aa9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.87
GTF2A1-203ENST00000553612 GTF3C4Q9UKN8 822 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms