RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SEMA3FQ13275 785 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 CCDC178Q5BJE1 867 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 MARCH8Q5T0T0 291 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 ZDHHC14Q8IZN3 488 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 DTWD2Q8NBA8 298 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 CASP10Q92851 521 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 INPP4AQ96PE3 977 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 TCF25Q9BQ70 676 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 RTP3Q9BQQ7 232 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 PUF60Q9UHX1 559 aaKnown RBP15.99■□□□□ 0.15
PRPF39-204ENST00000553605 LZTS1Q9Y250 596 aa15.99■□□□□ 0.15
PRPF39-204ENST00000553605 NCOR2Q9Y618 2525 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 TBKBP1A7MCY6 615 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 HIDE1A8MVS5 230 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 ARP10275 920 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 NPR3P17342 541 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 PAK2Q13177 524 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 TBC1D10CQ8IV04 446 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 PLCD3Q8N3E9 789 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 TDRD5Q8NAT2 981 aaKnown RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 MRPS27Q92552 414 aaKnown RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 FAM49AQ9H0Q0 323 aaPredicted RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 NGRNQ9NPE2 291 aaKnown RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 ENTPD7Q9NQZ7 604 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 TYW1Q9NV66 732 aaKnown RBP15.98■□□□□ 0.15
PRPF39-204ENST00000553605 DLL3Q9NYJ7 618 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 ZFHX4Q86UP3 3567 aa15.98■□□□□ 0.15
PRPF39-204ENST00000553605 FRYLO94915 3013 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 ZMYM6O95789 1325 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 M0QZ92 97 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 ZBTB5O15062 677 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 MARK3P27448 753 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 TCF7P36402 384 aaPredicted RBP15.97■□□□□ 0.15
PRPF39-204ENST00000553605 MTHFRP42898 656 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 PLCB3Q01970 1234 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 HINFPQ9BQA5 517 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 SENP7Q9BQF6 1050 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 TMX1Q9H3N1 280 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 ERAP1Q9NZ08 941 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 HCSTQ9UBK5 93 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 TRPV2Q9Y5S1 764 aa15.97■□□□□ 0.15
PRPF39-204ENST00000553605 NEDD4P46934 1319 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 IGSF9BQ9UPX0 1349 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 IGBP1P78318 339 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 TMEM62Q0P6H9 643 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 MCMDC2Q4G0Z9 681 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 FAM102BQ5T8I3 360 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
PRPF39-204ENST00000553605 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 MTMR8Q96EF0 704 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
PRPF39-204ENST00000553605 HCFC2Q9Y5Z7 792 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 DOCK5Q9H7D0 1870 aa15.96■□□□□ 0.15
PRPF39-204ENST00000553605 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 LAG3P18627 525 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 NFX1Q12986 1120 aaKnown RBP15.95■□□□□ 0.14
PRPF39-204ENST00000553605 TMC7Q7Z402 723 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
PRPF39-204ENST00000553605 FAM227BQ96M60 508 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
PRPF39-204ENST00000553605 CELF4Q9BZC1 486 aaKnown RBP15.95■□□□□ 0.14
PRPF39-204ENST00000553605 CWH43Q9H720 699 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
PRPF39-204ENST00000553605 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 R4GN57 208 aa15.95■□□□□ 0.14
PRPF39-204ENST00000553605 RRN3P2A6NIE6 340 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 KLRF2D3W0D1 207 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 NT5C2P49902 561 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 TRAF1Q13077 416 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 TMEM266Q2M3C6 531 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 ATAT1Q5SQI0 421 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
PRPF39-204ENST00000553605 SEPT1Q8WYJ6 367 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 GLG1Q92896 1179 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 EVI5LQ96CN4 794 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 ERVK-5Q9HDB9 667 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 CYP26B1Q9NR63 512 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 FNDC1Q4ZHG4 1894 aaPredicted RBP15.94■□□□□ 0.14
PRPF39-204ENST00000553605 FRMPD4Q14CM0 1322 aa15.94■□□□□ 0.14
PRPF39-204ENST00000553605 TPRP12270 2363 aaKnown RBP15.93■□□□□ 0.14
PRPF39-204ENST00000553605 A0A0D9SFI3 127 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 GSTTP1A0A1W2PQM5 241 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 MGEA5O60502 916 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 INSRRP14616 1297 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 MX1P20591 662 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 KRT17Q04695 432 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 RSPO4Q2I0M5 234 aaPredicted RBP15.93■□□□□ 0.14
PRPF39-204ENST00000553605 RARS2Q5T160 578 aaKnown RBP15.93■□□□□ 0.14
PRPF39-204ENST00000553605 FAM43BQ6ZT52 329 aaPredicted RBP15.93■□□□□ 0.14
PRPF39-204ENST00000553605 SLC24A5Q71RS6 500 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
PRPF39-204ENST00000553605 SIX5Q8N196 739 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms