RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 PKN1Q16512 942 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 FBXO47Q5MNV8 452 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 POTEBQ6S5H4 581 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 CDY2AQ9Y6F7 541 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 PIEZO1Q92508 2521 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 IGKV6D-21A0A0A0MT36 114 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 IPO5O00410 1097 aaKnown RBP17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 NTRK3Q16288 839 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 PHKBQ93100 1093 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 HLA-CQ95604 372 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 C17orf80Q9BSJ5 609 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 C11orf16Q9NQ32 467 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 TBC1D22BQ9NU19 505 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
SDR39U1-205ENST00000553546 RALGAPA2Q2PPJ7 1873 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 COL1A2P08123 1366 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 MUC6Q6W4X9 2439 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 SMIM35A0A1B0GVV1 85 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 DDX39AO00148 427 aaKnown RBP17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 HBP1O60381 514 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 CCNE2O96020 404 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 PDIA3P30101 505 aaKnown RBP17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 PTPROQ16827 1216 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 ABHD15Q6UXT9 468 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 TRIM22Q8IYM9 498 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 NME8Q8N427 588 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 ZNF577Q9BSK1 485 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 SLC26A6Q9BXS9 759 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 FTHL17Q9BXU8 183 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 ZNF302Q9NR11 478 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 SH3GLB2Q9NR46 395 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 NLRC5Q86WI3 1866 aa17.18■□□□□ 0.34
SDR39U1-205ENST00000553546 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 CIITAP33076 1130 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 KRT76Q01546 638 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 ZNF746Q6NUN9 644 aaPredicted RBP17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 KHSRPQ92945 711 aaKnown RBP eCLIP17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 IL17RAQ96F46 866 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 TM6SF1Q9BZW5 370 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 RWDD3Q9Y3V2 267 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
SDR39U1-205ENST00000553546 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 MTHFD1LQ6UB35 978 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 TMEM192Q8IY95 271 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 FIBCD1Q8N539 461 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 MRPL38Q96DV4 380 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 CELF4Q9BZC1 486 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 MYH9P35579 1960 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 TTC3P53804 2025 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 ADGRA3Q8IWK6 1321 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM86C2PA6NEL3 165 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 H3BNC9 293 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 ENPP3O14638 875 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 CPLX1O14810 134 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 KLRC1P26715 233 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 CD52P31358 61 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 PAK2Q13177 524 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 TOB2Q14106 344 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 TIGD5Q53EQ6 642 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 PRR16Q569H4 304 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
SDR39U1-205ENST00000553546 LOXHD1Q8IVV2 1947 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 RBAK-RBAKDNI3L0D1 243 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 PSAPP07602 524 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 USP11P51784 963 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 NLRP5P59047 1200 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 GPM6BQ13491 265 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 RASGRP4Q8TDF6 673 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 BBXQ8WY36 941 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms