RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	ANO6	Q4KMQ2	910 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	CREB3L3	Q68CJ9	461 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	RFX8	Q6ZV50	586 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	CDC37L1	Q7L3B6	337 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	DDX11	Q96FC9	970 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	WDR89	Q96FK6	387 aa	Predicted RBP	8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	BOC	Q9BWV1	1114 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	BTBD1	Q9H0C5	482 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	RETREG1	Q9H6L5	497 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	PRR13	Q9NZ81	148 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	SPO11	Q9Y5K1	396 aa		8.52	□□□□□ -1.05
PFKM-231	ENST00000553055	DNMT1	P26358	1616 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	FOXN3	O00409	490 aa	Predicted RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	KDM1A	O60341	852 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	CSTB	P04080	98 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	DHRS4L1	P0CG22	281 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	AGXT	P21549	392 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	AFF1	P51825	1210 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	CLNS1A	P54105	237 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	KIF23	Q02241	960 aa	Predicted RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	SCRN1	Q12765	414 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	CNN3	Q15417	329 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	PGS1	Q32NB8	556 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	MSL1	Q68DK7	614 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	DENND5A	Q6IQ26	1287 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	GDF6	Q6KF10	455 aa	Predicted RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	NPNT	Q6UXI9	565 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	LBX2	Q6XYB7	198 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	KREMEN2	Q8NCW0	462 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	FBXW5	Q969U6	566 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ABHD17A	Q96GS6	310 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	PAWR	Q96IZ0	340 aa	Known RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ZDHHC15	Q96MV8	337 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ORAI2	Q96SN7	254 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ZDHHC5	Q9C0B5	715 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	MBIP	Q9NS73	344 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	NDFIP2	Q9NV92	336 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	CWC25	Q9NXE8	425 aa	Predicted RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	FRRS1L	Q9P0K9	344 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	PKD2L1	Q9P0L9	805 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	NPFFR2	Q9Y5X5	522 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	NPHP4	O75161	1426 aa	Predicted RBP	8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ERBB4	Q15303	1308 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	MED14	O60244	1454 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	MLH3	Q9UHC1	1453 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	LRP6	O75581	1613 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	ABCA6	Q8N139	1617 aa		8.51	□□□□□ -1.05
PFKM-231	ENST00000553055	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	JCAD	Q9P266	1359 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	WNT9A	O14904	365 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SYNM	O15061	1565 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	IRAK2	O43187	625 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	DDX58	O95786	925 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	NCAM1	P13591	858 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	RPL17	P18621	184 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	PDC	P20941	246 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	C5AR1	P21730	350 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	RAD52	P43351	418 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	CASP5	P51878	434 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	UBAP2L	Q14157	1087 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SCARF1	Q14162	830 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	STARD3	Q14849	445 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	HSF5	Q4G112	596 aa	Predicted RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	FAM209B	Q5JX69	171 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	ITPRIPL1	Q6GPH6	555 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	FRMD7	Q6ZUT3	714 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	OTOP1	Q7RTM1	612 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	ZNF598	Q86UK7	904 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	MAP4K3	Q8IVH8	894 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	CISD2	Q8N5K1	135 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	ZNF527	Q8NB42	609 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SLC30A5	Q8TAD4	765 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	PHKB	Q93100	1093 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	TMEM41A	Q96HV5	264 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	GMCL1	Q96IK5	515 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	ZC3H10	Q96K80	434 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	PPP1R16B	Q96T49	567 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	LSM14B	Q9BX40	385 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	TRIT1	Q9H3H1	467 aa	Known RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SMYD2	Q9NRG4	433 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	ZNF277	Q9NRM2	450 aa	Predicted RBP	8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	CCDC39	Q9UFE4	941 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SLC6A14	Q9UN76	642 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	TMX2	Q9Y320	296 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	PCDHGC5	Q9Y5F6	944 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SNX13	Q9Y5W8	968 aa		8.5	□□□□□ -1.05
PFKM-231	ENST00000553055	SUPT6H	Q7KZ85	1726 aa	Known RBP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	FAM155A	B1AL88	458 aa	Predicted RBP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	EYA2	O00167	538 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	EIF3F	O00303	357 aa	Predicted RBP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	KPNA5	O15131	536 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	NDUFS2	O75306	463 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	SKAP2	O75563	359 aa	Predicted RBP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	KRT37	O76014	449 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	CST3	P01034	146 aa	Predicted RBP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	YBX3	P16989	372 aa	Known RBP eCLIP	8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	HTR1B	P28222	390 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	CDC25B	P30305	580 aa		8.49	□□□□□ -1.05
PFKM-231	ENST00000553055	LTBR	P36941	435 aa		8.49	□□□□□ -1.05

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