RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 RUFY4Q6ZNE9 571 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 TSHZ1Q6ZSZ6 1077 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 TMC7Q7Z402 723 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 IFNL3Q8IZI9 196 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 COLGALT1Q8NBJ5 622 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 LMBR1Q8WVP7 490 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 APPBP2Q92624 585 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 OSBP2Q969R2 916 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 ACSF2Q96CM8 615 aaPredicted RBP7.85□□□□□ -1.15
LETMD1-236ENST00000553043 ZFP91Q96JP5 570 aaPredicted RBP7.85□□□□□ -1.15
LETMD1-236ENST00000553043 BCAS3Q9H6U6 928 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 NGRNQ9NPE2 291 aaKnown RBP7.85□□□□□ -1.15
LETMD1-236ENST00000553043 WNT16Q9UBV4 365 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 PUF60Q9UHX1 559 aaKnown RBP7.85□□□□□ -1.15
LETMD1-236ENST00000553043 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
LETMD1-236ENST00000553043 ZMYM6O95789 1325 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 WDR19Q8NEZ3 1342 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 MYH4Q9Y623 1939 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 SOBPA7XYQ1 873 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 NOP56O00567 594 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 GPAA1O43292 621 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 ZIC2O95409 532 aaPredicted RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 UBA1P22314 1058 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 TGM1P22735 817 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 ADAM17P78536 824 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 PPARAQ07869 468 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 UTP14CQ5TAP6 766 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 KIAA1841Q6NSI8 718 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 XRRA1Q6P2D8 792 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 RSPH3Q86UC2 560 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 TRIM50Q86XT4 487 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 MAML2Q8IZL2 1156 aaPredicted RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 FEZF2Q8TBJ5 459 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 DNAJB3Q8WWF6 145 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 ATRIPQ8WXE1 791 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 RSAD2Q8WXG1 361 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 GPKOWQ92917 476 aaPredicted RBP eCLIP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 USP26Q9BXU7 913 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 FTHL17Q9BXU8 183 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 PARD6AQ9NPB6 346 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 TYW1Q9NV66 732 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 DLGAP2Q9P1A6 1054 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 SMG5Q9UPR3 1016 aaKnown RBP7.84□□□□□ -1.15
LETMD1-236ENST00000553043 PCDHB7Q9Y5E2 793 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 CDY2AQ9Y6F7 541 aa7.84□□□□□ -1.15
LETMD1-236ENST00000553043 CCDC171Q6TFL3 1326 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 WDR87Q6ZQQ6 2873 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 SLC30A4O14863 429 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 SPTLC1O15269 473 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 RANBP6O60518 1105 aaKnown RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 CLASP2O75122 1294 aaKnown RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 LRRN2O75325 713 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 FGRP09769 529 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 PCP11498 1178 aaKnown RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 NOVP48745 357 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 FAM102BQ5T8I3 360 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 TAF2Q6P1X5 1199 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 KCNV1Q6PIU1 500 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 TMC5Q6UXY8 1006 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 OTOP3Q7RTS5 596 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 CPVLQ9H3G5 476 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 PXMP2Q9NR77 195 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 LZTS1Q9Y250 596 aa7.83□□□□□ -1.16
LETMD1-236ENST00000553043 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.83□□□□□ -1.16
LETMD1-236ENST00000553043 NRCAMQ92823 1304 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 SALL3Q9BXA9 1300 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 C2orf71A6NGG8 1288 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 M0R2C6 588 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 RNF113AO15541 343 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 CFBP00751 764 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 PROS1P07225 676 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 HSPD1P10809 573 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 PDHBP11177 359 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 TOP1P11387 765 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 GLULP15104 373 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 PBX3P40426 434 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 TTC3P53804 2025 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 MRPS6P82932 125 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 PLCB3Q01970 1234 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 SP4Q02446 784 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 CSTF1Q05048 431 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 HDAC1Q13547 482 aaPredicted RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 ALX1Q15699 326 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 CCDC149Q6ZUS6 474 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 MRPL43Q8N983 215 aaKnown RBP7.82□□□□□ -1.16
LETMD1-236ENST00000553043 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 GPR20Q99678 358 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 TMEM47Q9BQJ4 181 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 NACAP1Q9BZK3 213 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 FOXQ1Q9C009 403 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
LETMD1-236ENST00000553043 FAM49AQ9H0Q0 323 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms