RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 HBP1O60381 514 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 EPHB4P54760 987 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 PRKCEQ02156 737 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 BFSP2Q13515 415 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 RUFY4Q6ZNE9 571 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 C4orf32Q8N8J7 132 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 TUBE1Q9UJT0 475 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 MTMR6Q9Y217 621 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 ARID2Q68CP9 1835 aa15.88■□□□□ 0.13
PTCH1-226ENST00000553011 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-226ENST00000553011 RRN3P2A6NIE6 340 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 ZBTB42B2RXF5 422 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 CKBP12277 381 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 BMP8BP34820 402 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 RBL2Q08999 1139 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 PTGDRQ13258 359 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 EPHA7Q15375 998 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 TMEM199Q8N511 208 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
PTCH1-226ENST00000553011 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-226ENST00000553011 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.87■□□□□ 0.13
PTCH1-226ENST00000553011 TMEM150BA6NC51 233 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 POTEMA6NI47 508 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 STX6O43752 255 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 STBD1O95210 358 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 OATP04181 439 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 IQCF3P0C7M6 154 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 ACRP10323 421 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 THPOP40225 353 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 PSMC5P62195 406 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 RESTQ13127 1097 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTCH1-226ENST00000553011 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 ZNF618Q5T7W0 954 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 TRAF7Q6Q0C0 670 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
PTCH1-226ENST00000553011 DYDC2Q96IM9 177 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 FAM167AQ96KS9 214 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 RGL1Q9NZL6 768 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-226ENST00000553011 COL1A2P08123 1366 aa15.86■□□□□ 0.13
PTCH1-226ENST00000553011 P4HBP07237 508 aaKnown RBP15.85■□□□□ 0.13
PTCH1-226ENST00000553011 SELPP16109 830 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 TECP42680 631 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
PTCH1-226ENST00000553011 CYP4A11Q02928 519 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 CTTNQ14247 550 aaKnown RBP15.85■□□□□ 0.13
PTCH1-226ENST00000553011 C9orf50Q5SZB4 431 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 MTHFD1LQ6UB35 978 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 LRRC8DQ7L1W4 858 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 C16orf59Q7L2K0 433 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 VWCEQ96DN2 955 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 EIF2AK1Q9BQI3 630 aaKnown RBP15.85■□□□□ 0.13
PTCH1-226ENST00000553011 LXNQ9BS40 222 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 FAM49AQ9H0Q0 323 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-226ENST00000553011 IL23AQ9NPF7 189 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 NRBP2Q9NSY0 501 aa15.85■□□□□ 0.13
PTCH1-226ENST00000553011 CTSHP09668 335 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 KLRC1P26715 233 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 MBTPS1Q14703 1052 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 SHHQ15465 462 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 XKR3Q5GH77 459 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 TAF2Q6P1X5 1199 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 FAM173BQ6P4H8 233 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 DEFB128Q7Z7B8 93 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 DNAJB3Q8WWF6 145 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 SH2D3AQ9BRG2 576 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 SEPT9Q9UHD8 586 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-226ENST00000553011 PCDHA2Q9Y5H9 948 aa15.84■□□□□ 0.13
PTCH1-226ENST00000553011 DDX11L8A8MPP1 907 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 C22orf31O95567 290 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 GPNMBQ14956 572 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 IL17AQ16552 155 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 MTERF2Q49AM1 385 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 TMEM240Q5SV17 173 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 FOXD4L5Q5VV16 416 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-226ENST00000553011 PLA2G4FQ68DD2 849 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 ZNF365Q70YC5 407 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 ANO5Q75V66 913 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 TDHQ8IZJ6 230 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 FOXD4L4Q8WXT5 416 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-226ENST00000553011 HSD17B14Q9BPX1 270 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTCH1-226ENST00000553011 CEP131Q9UPN4 1083 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 MICAL3Q7RTP6 2002 aa15.83■□□□□ 0.12
PTCH1-226ENST00000553011 SMIM35A0A1B0GVV1 85 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 NBNO60934 754 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 CAND2O75155 1236 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 SLITRK3O94933 977 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 RFC2P35250 354 aa15.82■□□□□ 0.12
PTCH1-226ENST00000553011 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms