RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CPT1AP50416 773 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 SP4Q02446 784 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 PNOCQ13519 176 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 MCM6Q14566 821 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 KCNB1Q14721 858 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 DGKDQ16760 1214 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 HSDL1Q3SXM5 330 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 OR6J1Q8NGC5 347 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 TRIM9Q9C026 710 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 BHMT2Q9H2M3 363 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 SPC25Q9HBM1 224 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 ANO10Q9NW15 660 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 ZNF215Q9UL58 517 aaPredicted RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 GNEQ9Y223 722 aaKnown RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 A6NJR5 290 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 SEPT4O43236 478 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 MSCO60682 206 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEK3-203ENST00000551355 KRT18P05783 430 aaKnown RBP11.58□□□□□ -0.56
NEK3-203ENST00000551355 PPP1R2P41236 205 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 PSMC6P62333 389 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 PSMD2Q13200 908 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 STX1AQ16623 288 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 PRAMEF19Q5SWL8 479 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 KCNK18Q7Z418 384 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 GPBP1Q86WP2 473 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 CCDC60Q8IWA6 550 aaPredicted RBP11.58□□□□□ -0.56
NEK3-203ENST00000551355 CCDC65Q8IXS2 484 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
NEK3-203ENST00000551355 DDX12PQ92771 950 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 GLG1Q92896 1179 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 MTRQ99707 1265 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 NIFKQ9BYG3 293 aaKnown RBP11.58□□□□□ -0.56
NEK3-203ENST00000551355 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
NEK3-203ENST00000551355 BCAS3Q9H6U6 928 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 ERAP1Q9NZ08 941 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 KCNG1Q9UIX4 513 aa11.58□□□□□ -0.56
NEK3-203ENST00000551355 LRRC37A2A6NM11 1700 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 FOXN1O15353 648 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 ZEB2O60315 1214 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 OATP04181 439 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 RARBP10826 455 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 CYP11B2P19099 503 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 GUCY2CP25092 1073 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 RARRES1P49788 294 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 NLRP12P59046 1061 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 ASIC1P78348 528 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 NKX3-2P78367 333 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 PRKCEQ02156 737 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 TYRO3Q06418 890 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 CUL4BQ13620 913 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 DHX8Q14562 1220 aaKnown RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 MAP3K21Q5TCX8 1036 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 TLK2Q86UE8 772 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 GRAMD1CQ8IYS0 662 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 MLKLQ8NB16 471 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 LRRC15Q8TF66 581 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 AFG1LQ8WV93 481 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 COPS5Q92905 334 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 JPH2Q9BR39 696 aaPredicted RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 TSPY26PQ9H489 355 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 WRAP73Q9P2S5 460 aaPredicted RBP11.57□□□□□ -0.56
NEK3-203ENST00000551355 ODF2LQ9ULJ1 636 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 TRIM17Q9Y577 477 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 COL4A3BPQ9Y5P4 624 aa11.57□□□□□ -0.56
NEK3-203ENST00000551355 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
NEK3-203ENST00000551355 MYMKA6NI61 221 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 GAS2O43903 313 aaKnown RBP11.56□□□□□ -0.56
NEK3-203ENST00000551355 ZNF862O60290 1169 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 HBP1O60381 514 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 SORBS3O60504 671 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 TBCAO75347 108 aaKnown RBP11.56□□□□□ -0.56
NEK3-203ENST00000551355 DGAT1O75907 488 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 RHOBTB3O94955 611 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 MMP3P08254 477 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
NEK3-203ENST00000551355 GAP43P17677 238 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 CNGA1P29973 690 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 GRK4P32298 578 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 RFC5P40937 340 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 MORC3Q14149 939 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 UGCGQ16739 394 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 XKR9Q5GH70 373 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 RINT1Q6NUQ1 792 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 C1orf186Q6ZWK4 172 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms