RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 E9PSI1 815 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 NOP56O00567 594 aaKnown RBP6.57□□□□□ -1.36
SCAF11-214ENST00000550893 N4BP3O15049 544 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 DDAH1O94760 285 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 PAMP19021 973 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 SCRN1Q12765 414 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 NR1I3Q14994 352 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-214ENST00000550893 GTF2IRD2BQ6EKJ0 949 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 MRM1Q6IN84 353 aaKnown RBP6.57□□□□□ -1.36
SCAF11-214ENST00000550893 GTF2IRD2Q86UP8 949 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 MORC1Q86VD1 984 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 LDHDQ86WU2 507 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 COL23A1Q86Y22 540 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-214ENST00000550893 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 CRACR2BQ8N4Y2 399 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-214ENST00000550893 SLC43A3Q8NBI5 491 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 COPS5Q92905 334 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 MRGPRX3Q96LB0 322 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 KCTD3Q9Y597 815 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 SBF1O95248 1867 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 CACNA1SQ13698 1873 aa6.57□□□□□ -1.36
SCAF11-214ENST00000550893 NPHP3-ACAD11A0A0J9YXS1 232 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-214ENST00000550893 CYBBP04839 570 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 MAPKAPK2P49137 400 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 FXNQ16595 210 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 SULT6B1Q6IMI4 303 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
SCAF11-214ENST00000550893 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 MZB1Q8WU39 189 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 PHACTR3Q96KR7 559 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 SIGLEC10Q96LC7 697 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 GMLQ99445 158 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 CLEC1BQ9P126 229 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 FBLN5Q9UBX5 448 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 RWDD3Q9Y3V2 267 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 KNSTRNQ9Y448 316 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 C10orf71Q711Q0 1435 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 ANKRD36CQ5JPF3 1778 aa6.56□□□□□ -1.36
SCAF11-214ENST00000550893 PXDNLA1KZ92 1463 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 LAMB2P55268 1798 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 IRS4O14654 1257 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-214ENST00000550893 TBX1O43435 398 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 SUSD5O60279 629 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 HMOX1P09601 288 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 PLS3P13797 630 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 PI3P19957 117 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 NCKAP1LP55160 1127 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 MTHFSDQ2M296 383 aaKnown RBP6.55□□□□□ -1.36
SCAF11-214ENST00000550893 SV2CQ496J9 727 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 ZNF385BQ569K4 471 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 ZNF530Q6P9A1 599 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-214ENST00000550893 IGDCC3Q8IVU1 814 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 PANK1Q8TE04 598 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 HNRNPLLQ8WVV9 542 aaKnown RBP6.55□□□□□ -1.36
SCAF11-214ENST00000550893 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 NKX2-4Q9H2Z4 354 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 GULP1Q9UBP9 304 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 CCNL1Q9UK58 526 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-214ENST00000550893 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 NUP98P52948 1817 aa6.55□□□□□ -1.36
SCAF11-214ENST00000550893 TRBV23OR9-2A0A075B6M9 112 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 ZC3H12DA2A288 527 aaKnown RBP6.54□□□□□ -1.36
SCAF11-214ENST00000550893 C7orf72A4D263 438 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-214ENST00000550893 GJB6O95452 261 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 ITGAVP06756 1048 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 THBDP07204 575 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 GLI4P10075 376 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 ZNF200P98182 395 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-214ENST00000550893 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 TMEFF1Q8IYR6 380 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 IFNL2Q8IZJ0 200 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 MTA3Q9BTC8 594 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 SPON1Q9HCB6 807 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-214ENST00000550893 STK32BQ9NY57 414 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 COL4A1P02462 1669 aa6.54□□□□□ -1.36
SCAF11-214ENST00000550893 CCDC88AQ3V6T2 1871 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 IRS2Q9Y4H2 1338 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 RFXAPO00287 272 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 RNMTO43148 476 aaKnown RBP6.53□□□□□ -1.36
SCAF11-214ENST00000550893 PRR5P85299 388 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 ANKS3Q6ZW76 656 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
SCAF11-214ENST00000550893 IL17REQ8NFR9 667 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms