RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
TROAP-213ENST00000550709 MTMR9Q96QG7 549 aa15.46■□□□□ 0.07
TROAP-213ENST00000550709 TTC12Q9H892 705 aaPredicted RBP15.46■□□□□ 0.07
TROAP-213ENST00000550709 TUBE1Q9UJT0 475 aa15.46■□□□□ 0.07
TROAP-213ENST00000550709 PCDHB6Q9Y5E3 794 aa15.46■□□□□ 0.07
TROAP-213ENST00000550709 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 CTSHP09668 335 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 OR52Z1P0C646 297 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 IQCF3P0C7M6 154 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 SELPP16109 830 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 ZNF618Q5T7W0 954 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 LRRC8DQ7L1W4 858 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 C16orf59Q7L2K0 433 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 FAM49AQ9H0Q0 323 aaPredicted RBP15.45■□□□□ 0.06
TROAP-213ENST00000550709 IL23AQ9NPF7 189 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 NRBP2Q9NSY0 501 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 DOCK5Q9H7D0 1870 aa15.45■□□□□ 0.06
TROAP-213ENST00000550709 IGSF9BQ9UPX0 1349 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 MBLAC1A4D2B0 266 aaPredicted RBP15.44■□□□□ 0.06
TROAP-213ENST00000550709 TMEM150BA6NC51 233 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 DDX11L8A8MPP1 907 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 OATP04181 439 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 KLRC1P26715 233 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 CYP4A11Q02928 519 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 EPHA7Q15375 998 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 ZNF484Q5JVG2 852 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
TROAP-213ENST00000550709 ZNF365Q70YC5 407 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 TDHQ8IZJ6 230 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
TROAP-213ENST00000550709 DYDC2Q96IM9 177 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 FTOQ9C0B1 505 aaKnown RBP eCLIP15.44■□□□□ 0.06
TROAP-213ENST00000550709 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
TROAP-213ENST00000550709 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 ZBTB42B2RXF5 422 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 TECP42680 631 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
TROAP-213ENST00000550709 PSMC5P62195 406 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 PTGDRQ13258 359 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 ORC2Q13416 577 aaPredicted RBP15.43■□□□□ 0.06
TROAP-213ENST00000550709 CTTNQ14247 550 aaKnown RBP15.43■□□□□ 0.06
TROAP-213ENST00000550709 RILPL1Q5EBL4 403 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 TMEM240Q5SV17 173 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 TAF2Q6P1X5 1199 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 MTHFD1LQ6UB35 978 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 TPH2Q8IWU9 490 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
TROAP-213ENST00000550709 C4orf32Q8N8J7 132 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.06
TROAP-213ENST00000550709 SH2D3AQ9BRG2 576 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
TROAP-213ENST00000550709 TRIOBPQ9H2D6 2365 aa15.43■□□□□ 0.06
TROAP-213ENST00000550709 POTEMA6NI47 508 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 FGBP02675 491 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 RBL2Q08999 1139 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 TMEM62Q0P6H9 643 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 MTERF2Q49AM1 385 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 XKR3Q5GH77 459 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 TRAF7Q6Q0C0 670 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 OTOP2Q7RTS6 562 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 BRAPQ7Z569 592 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 RSPH3Q86UC2 560 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 METTL13Q8N6R0 699 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 VWCEQ96DN2 955 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 RNPC3Q96LT9 517 aaKnown RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 LXNQ9BS40 222 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 WRAP73Q9P2S5 460 aaPredicted RBP15.42■□□□□ 0.06
TROAP-213ENST00000550709 MTMR6Q9Y217 621 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 PCDHA2Q9Y5H9 948 aa15.42■□□□□ 0.06
TROAP-213ENST00000550709 A0A087WWV3 80 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 STX6O43752 255 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 NBNO60934 754 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 STBD1O95210 358 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 C22orf31O95567 290 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 MBTPS1Q14703 1052 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 GPNMBQ14956 572 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 PSRC1Q6PGN9 363 aaPredicted RBP15.41■□□□□ 0.06
TROAP-213ENST00000550709 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
TROAP-213ENST00000550709 CEP131Q9UPN4 1083 aa15.41■□□□□ 0.06
TROAP-213ENST00000550709 COL1A2P08123 1366 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 ZBBXA8MT70 800 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 ZBTB39O15060 712 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 SLITRK3O94933 977 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 CHRNA1P02708 482 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 RFC2P35250 354 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 NPEPPSP55786 919 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 RESTQ13127 1097 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
TROAP-213ENST00000550709 KIAA0319LQ8IZA0 1049 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms