RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 ZNF76P36508 570 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
LETMD1-223ENST00000550442 ALCAMQ13740 583 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 BRD3Q15059 726 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 BMT2Q1RMZ1 405 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 HSP90AA4PQ58FG1 418 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 RAD9BQ6WBX8 426 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
LETMD1-223ENST00000550442 CPLX3Q8WVH0 158 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 HNRNPLLQ8WVV9 542 aaKnown RBP13.04□□□□□ -0.32
LETMD1-223ENST00000550442 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 RIT2Q99578 217 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 GDF15Q99988 308 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 SEMA6BQ9H3T3 888 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
LETMD1-223ENST00000550442 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
LETMD1-223ENST00000550442 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 PRR12Q9ULL5 1215 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 TRAF3IP3Q9Y228 551 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
LETMD1-223ENST00000550442 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
LETMD1-223ENST00000550442 SLC16A3O15427 465 aaKnown RBP13.03□□□□□ -0.32
LETMD1-223ENST00000550442 ERLIN1O75477 346 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 TADA3O75528 432 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 EYA4O95677 639 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 IDEP14735 1019 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 COL9A1P20849 921 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 ABCD1P33897 745 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 SLC16A2P36021 539 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
LETMD1-223ENST00000550442 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 COASYQ13057 564 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 UBE2SQ16763 222 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 CALR3Q96L12 384 aaKnown RBP13.03□□□□□ -0.32
LETMD1-223ENST00000550442 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 ZCCHC17Q9NP64 241 aaKnown RBP13.03□□□□□ -0.32
LETMD1-223ENST00000550442 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 RNF14Q9UBS8 474 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
LETMD1-223ENST00000550442 ALPK3Q96L96 1907 aa13.02□□□□□ -0.32
LETMD1-223ENST00000550442 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 GTPBP10A4D1E9 387 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 POTEMA6NI47 508 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 B4DLN1 442 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 SGPL1O95470 568 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 KRT18P05783 430 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 CYP11B2P19099 503 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 SCP2P22307 547 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 CAP2P40123 477 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 PSMC4P43686 418 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 PMS1P54277 932 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 USP14P54578 494 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 SLC12A3P55017 1021 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 ITIH3Q06033 890 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MIIPQ5JXC2 388 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 TMCO3Q6UWJ1 677 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 RSRC2Q7L4I2 434 aaKnown RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 SMAP1Q8IYB5 467 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 TDHQ8IZJ6 230 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 NEK11Q8NG66 645 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-223ENST00000550442 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MKNK1Q9BUB5 465 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 CEP72Q9P209 647 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 ODF2LQ9ULJ1 636 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MAPK8IP1Q9UQF2 711 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 CSADQ9Y600 493 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
LETMD1-223ENST00000550442 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
LETMD1-223ENST00000550442 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
LETMD1-223ENST00000550442 GFPT2O94808 682 aa13.01□□□□□ -0.33
LETMD1-223ENST00000550442 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms