RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 BEX3Q00994 111 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 PNOCQ13519 176 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 POSTNQ15063 836 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 PLA2G4FQ68DD2 849 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 SV2BQ7L1I2 683 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 CTU1Q7Z7A3 348 aaKnown RBP9.09□□□□□ -0.95
GPN3-207ENST00000550228 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 PPTC7Q8NI37 304 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 EMID1Q96A84 441 aaPredicted RBP9.09□□□□□ -0.95
GPN3-207ENST00000550228 PAGE5Q96GU1 130 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 CCDC34Q96HJ3 373 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 NACC1Q96RE7 527 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 SH2D3AQ9BRG2 576 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 BLZF1Q9H2G9 400 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 BHMT2Q9H2M3 363 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 CUEDC2Q9H467 287 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 MAGEF1Q9HAY2 307 aa9.09□□□□□ -0.95
GPN3-207ENST00000550228 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
GPN3-207ENST00000550228 SYNRGQ9UMZ2 1314 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 IGKV6D-21A0A0A0MT36 114 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 SYCE3A1L190 88 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 ARHGEF35A5YM69 484 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 MYADML2A6NDP7 307 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 CTAGE5O15320 804 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 DKC1O60832 514 aaKnown RBP eCLIP9.08□□□□□ -0.96
GPN3-207ENST00000550228 DUSP11O75319 330 aaKnown RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 LGR5O75473 907 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 LYPLA2O95372 231 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 PGK1P00558 417 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 OATP04181 439 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 KRT18P05783 430 aaKnown RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 C6orf222P0C671 652 aaPredicted RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 MUTP22033 750 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 YWHABP31946 246 aaKnown RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 CHMP4BP1P59074 171 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 CUL4BQ13620 913 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 DGKDQ16760 1214 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 SLC9C1Q4G0N8 1177 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 XKR9Q5GH70 373 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 MAP3K21Q5TCX8 1036 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 KANK3Q6NY19 840 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 SH3RF1Q7Z6J0 888 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 C4orf19Q8IY42 314 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 MTRQ99707 1265 aa9.08□□□□□ -0.96
GPN3-207ENST00000550228 BMP2KQ9NSY1 1161 aaPredicted RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 DDX20Q9UHI6 824 aaKnown RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
GPN3-207ENST00000550228 EMSYQ7Z589 1322 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 MYH11P35749 1972 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 NPHP3-ACAD11A0A0J9YXS1 232 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 MYMKA6NI61 221 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 BIN1O00499 593 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 USO1O60763 962 aaKnown RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 ATP4AP20648 1035 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 CPT1AP50416 773 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 NPEPPSP55786 919 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 ASIC1P78348 528 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 AMPD3Q01432 767 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 CACNB1Q02641 598 aaPredicted RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 PLCB4Q15147 1175 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 FSCN1Q16658 493 aaKnown RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 ZSCAN23Q3MJ62 389 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 MTERF2Q49AM1 385 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 BRDTQ58F21 947 aaPredicted RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 XKR3Q5GH77 459 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 ISM2Q6H9L7 571 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 DYMQ7RTS9 669 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 AFAP1L1Q8TED9 768 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 SMARCE1Q969G3 411 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 FAM167AQ96KS9 214 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 CEP170P1Q96L14 293 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 RUSC1Q9BVN2 902 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
GPN3-207ENST00000550228 UNC93B1Q9H1C4 597 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 UPF3AQ9H1J1 476 aaKnown RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 SMARCAD1Q9H4L7 1026 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 SPC25Q9HBM1 224 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 XPNPEP3Q9NQH7 507 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 ANKEF1Q9NU02 776 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 TRPC6Q9Y210 931 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 Q9Y3F1 56 aa9.07□□□□□ -0.96
GPN3-207ENST00000550228 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
GPN3-207ENST00000550228 KAT6AQ92794 2004 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 A6NJR5 290 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 PPFIA4O75335 1185 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 STBD1O95210 358 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 SMC2O95347 1197 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 IDEP14735 1019 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 CYP11B2P19099 503 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 RARRES1P49788 294 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 GJA9P57773 515 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
GPN3-207ENST00000550228 DPYDQ12882 1025 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 MTFR1Q15390 333 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms