RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ITGB1P05556 798 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 MARK3P27448 753 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 CD52P31358 61 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 COASYQ13057 564 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 MTMR1Q13613 665 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 CLUL1Q15846 466 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PKN1Q16512 942 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PLPPR4Q7Z2D5 763 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 TEX2Q8IWB9 1127 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PCYT2Q99447 389 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 CLEC1BQ9P126 229 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 MUTYHQ9UIF7 546 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PADI3Q9ULW8 664 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PCDHB8Q9UN66 801 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 MRPL42Q9Y6G3 142 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 KDM3AQ9Y4C1 1321 aa11.3□□□□□ -0.6
TRAFD1-207ENST00000550051 TRIOO75962 3097 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 TECTAO75443 2155 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 SGSM2O43147 1006 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 PDE4AP27815 886 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 SMRP1Q8NCR6 262 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 POF1BQ8WVV4 589 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 PCDHA6Q9UN73 950 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 PCDHA8Q9Y5H6 950 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 KIAA1671Q9BY89 1806 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 IGSF9BQ9UPX0 1349 aa11.29□□□□□ -0.6
TRAFD1-207ENST00000550051 SMIM35A0A1B0GVV1 85 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 STK25O00506 426 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 ATG7O95352 703 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 CALM1P0DP23 149 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 CALM2P0DP24 149 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 CALM3P0DP25 149 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 LIFRP42702 1097 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 NDUFV1P49821 464 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 SLC26A2P50443 739 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 IGBP1P78318 339 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 UBE3AQ05086 875 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 CBX2Q14781 532 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 TRIM67Q6ZTA4 783 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 EXOC6Q8TAG9 804 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 TMEM87BQ96K49 555 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 PRRX2Q99811 253 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 MXRA8Q9BRK3 442 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 MYL10Q9BUA6 226 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 AZI2Q9H6S1 392 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 JPH1Q9HDC5 661 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 SLC9A2Q9UBY0 812 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 NFASCO94856 1347 aa11.28□□□□□ -0.6
TRAFD1-207ENST00000550051 M0QZ92 97 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 PRC1O43663 620 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 SCG2P13521 617 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 MCM5P33992 734 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 STAT5BP51692 787 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 ZXDAP98168 799 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 KRT76Q01546 638 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 PDE12Q6L8Q7 609 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 CASC1Q6TDU7 716 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 ADGRD2Q7Z7M1 963 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 ATP8B4Q8TF62 1192 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 ZBTB10Q96DT7 871 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 TMX1Q9H3N1 280 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.61
TRAFD1-207ENST00000550051 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 M0R296 226 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 MEIS1O00470 390 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 MAP3K13O43283 966 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 GLP2RO95838 553 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 NRIP1P48552 1158 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 SARSP49591 514 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 ACTR2P61160 394 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 FAM189BP81408 668 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PAK2Q13177 524 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 UBE2SQ16763 222 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 ODR4Q5SWX8 454 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms