RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RNF20Q5VTR2 975 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 PPP1R18Q6NYC8 613 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 PCYT2Q99447 389 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 CELF4Q9BZC1 486 aaKnown RBP15.5■□□□□ 0.07
TROAP-211ENST00000549891 GLT8D2Q9H1C3 349 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 IGFLR1Q9H665 355 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 ALG13Q9NP73 1137 aaKnown RBP15.5■□□□□ 0.07
TROAP-211ENST00000549891 RIC8AQ9NPQ8 531 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 PADI3Q9ULW8 664 aa15.5■□□□□ 0.07
TROAP-211ENST00000549891 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 hCG_1984214I3L0E3 225 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 MBTPS2O43462 519 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 SCG2P13521 617 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 PLCB4Q15147 1175 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 NECTIN1Q15223 517 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 ZNF713Q8N859 430 aaPredicted RBP15.49■□□□□ 0.07
TROAP-211ENST00000549891 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 ESYT1Q9BSJ8 1104 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 KCNH6Q9H252 994 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 CD207Q9UJ71 328 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 LRFN2Q9ULH4 789 aa15.49■□□□□ 0.07
TROAP-211ENST00000549891 MRPL42Q9Y6G3 142 aaKnown RBP15.49■□□□□ 0.07
TROAP-211ENST00000549891 FNDC1Q4ZHG4 1894 aaPredicted RBP15.48■□□□□ 0.07
TROAP-211ENST00000549891 PLXNA4Q9HCM2 1894 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 NDUFV1P49821 464 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 ADCY7P51828 1080 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 KRT76Q01546 638 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 ADAM15Q13444 863 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 CLUL1Q15846 466 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 FAM160B1Q5W0V3 765 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 WWC2Q6AWC2 1192 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 APOA5Q6Q788 366 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 MTHFD1LQ6UB35 978 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
TROAP-211ENST00000549891 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 ZBTB10Q96DT7 871 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
TROAP-211ENST00000549891 ANO2Q9NQ90 1003 aa15.48■□□□□ 0.07
TROAP-211ENST00000549891 CNTNAP5Q8WYK1 1306 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 HBP1O60381 514 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 TBX10O75333 385 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 CSPG5O95196 566 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 ATG7O95352 703 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 ITGB1P05556 798 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 ARP10275 920 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 IRS1P35568 1242 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 ZNF76P36508 570 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 DLX2Q07687 328 aaPredicted RBP15.47■□□□□ 0.07
TROAP-211ENST00000549891 AP3B2Q13367 1082 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 PAN2Q504Q3 1202 aaKnown RBP15.47■□□□□ 0.07
TROAP-211ENST00000549891 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 KLHL23Q8NBE8 558 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 SPPL3Q8TCT6 385 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 TRAPPC12Q8WVT3 735 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 ANO3Q9BYT9 981 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 AAASQ9NRG9 546 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 COL1A2P08123 1366 aa15.47■□□□□ 0.07
TROAP-211ENST00000549891 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 STXBP3O00186 592 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 MEIS1O00470 390 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 BACH1O14867 736 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 ZBTB43O43298 467 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 KLRC1P26715 233 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 SREBF1P36956 1147 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 SARSP49591 514 aaKnown RBP15.46■□□□□ 0.07
TROAP-211ENST00000549891 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
TROAP-211ENST00000549891 CAMK1Q14012 370 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 RTN1Q16799 776 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 EFHBQ8N7U6 833 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 POF1BQ8WVV4 589 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 C1orf112Q9NSG2 853 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 PCDHB12Q9Y5F1 795 aa15.46■□□□□ 0.07
TROAP-211ENST00000549891 IGKV6D-21A0A0A0MT36 114 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 DENND3A2RUS2 1198 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 LINC01565O15544 149 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 RPS6KA5O75582 802 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 EYA4O95677 639 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 GTF2F1P35269 517 aaKnown RBP eCLIP15.45■□□□□ 0.06
TROAP-211ENST00000549891 UBE3AQ05086 875 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 ITGB3BPQ13352 177 aaPredicted RBP15.45■□□□□ 0.06
TROAP-211ENST00000549891 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
TROAP-211ENST00000549891 HERC4Q5GLZ8 1057 aaPredicted RBP15.45■□□□□ 0.06
TROAP-211ENST00000549891 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 PGBD1Q96JS3 809 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 MSLNLQ96KJ4 702 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 MFSD14AQ96MC6 490 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 BARHL2Q9NY43 387 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 GINS2Q9Y248 185 aa15.45■□□□□ 0.06
TROAP-211ENST00000549891 V9GY48 417 aaPredicted RBP15.45■□□□□ 0.06
TROAP-211ENST00000549891 PIEZO1Q92508 2521 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms