RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 NME8Q8N427 588 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 USP38Q8NB14 1042 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-206ENST00000548984 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 MBOAT7Q96N66 472 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 RAD9AQ99638 391 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 IFIH1Q9BYX4 1025 aaKnown RBP11.57□□□□□ -0.56
PFDN5-206ENST00000548984 PRDM12Q9H4Q4 367 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 ORC3Q9UBD5 711 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-206ENST00000548984 CEP131Q9UPN4 1083 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-206ENST00000548984 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 SQORQ9Y6N5 450 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 SIP14410 1827 aa11.57□□□□□ -0.56
PFDN5-206ENST00000548984 MSH4O15457 936 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 MYOGP15173 224 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 TCTN1Q2MV58 587 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 LRCH2Q5VUJ6 765 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 SWSAP1Q6NVH7 229 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 TSHZ1Q6ZSZ6 1077 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 CKAP2LQ8IYA6 745 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 DNAJB3Q8WWF6 145 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 AIFM3Q96NN9 605 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 SAMM50Q9Y512 469 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 TRPV2Q9Y5S1 764 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 CDY2AQ9Y6F7 541 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 KDM3AQ9Y4C1 1321 aa11.56□□□□□ -0.56
PFDN5-206ENST00000548984 ST18O60284 1047 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 CTDNEP1O95476 244 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 TDP2O95551 362 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 CHRNA1P02708 482 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 GHRP10912 638 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 TAP1Q03518 808 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 LPIN1Q14693 890 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 ME3Q16798 604 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 FBXO47Q5MNV8 452 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 MTHFD1LQ6UB35 978 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.55□□□□□ -0.56
PFDN5-206ENST00000548984 MYOCDQ8IZQ8 938 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 FAM49AQ9H0Q0 323 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-206ENST00000548984 DISC1Q9NRI5 854 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 GABBR1Q9UBS5 961 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 KCNJ14Q9UNX9 436 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 INSL6Q9Y581 213 aa11.55□□□□□ -0.56
PFDN5-206ENST00000548984 MYH9P35579 1960 aaKnown RBP11.55□□□□□ -0.56
PFDN5-206ENST00000548984 CHD9Q3L8U1 2897 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 MAGEB2O15479 319 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 EDIL3O43854 480 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 PSMD10O75832 226 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 SEC24BO95487 1268 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 OATP04181 439 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 KLRC1P26715 233 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 KRT2P35908 639 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 MCM2P49736 904 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 RBM25P49756 843 aaKnown RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 HTRA4P83105 476 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 TRIM29Q14134 588 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 INF2Q27J81 1249 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 ODR4Q5SWX8 454 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 PPP4R3AQ6IN85 833 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.54□□□□□ -0.562e-10■■■■■ 40.7
PFDN5-206ENST00000548984 NSUN7Q8NE18 718 aaKnown RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 ETNPPLQ8TBG4 499 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 TRAPPC12Q8WVT3 735 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 FAM20AQ96MK3 541 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 FTHL17Q9BXU8 183 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 CELF4Q9BZC1 486 aaKnown RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
PFDN5-206ENST00000548984 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 COL6A3P12111 3177 aa11.54□□□□□ -0.56
PFDN5-206ENST00000548984 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-206ENST00000548984 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-206ENST00000548984 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 TBX3O15119 743 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 CHMP2AO43633 222 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 LARGE1O95461 756 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 C22orf31O95567 290 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 POU3F3P20264 500 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-206ENST00000548984 ATP4AP20648 1035 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 IGFBP4P22692 258 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 PRKCEQ02156 737 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 ADGRE1Q14246 886 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 RABEP1Q15276 862 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 B3GNT9Q6UX72 402 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 TOP1MTQ969P6 601 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 SAMD11Q96NU1 681 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 TGS1Q96RS0 853 aaKnown RBP11.53□□□□□ -0.56
PFDN5-206ENST00000548984 YME1L1Q96TA2 773 aa11.53□□□□□ -0.56
PFDN5-206ENST00000548984 UNC45AQ9H3U1 944 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms