RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 METTL13Q8N6R0 699 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SEC14L1Q92503 715 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 MXD3Q9BW11 206 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 PSTPIP2Q9H939 334 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 GEMIN8Q9NWZ8 242 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SUCLA2Q9P2R7 463 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 STXBP5LQ9Y2K9 1186 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 NOC2LQ9Y3T9 749 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 NPHP3-ACAD11A0A0J9YXS1 232 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 GMNCA6NCL1 334 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 E7EVH7 732 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 PDXKO00764 312 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 KRT18P05783 430 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 ACTN1P12814 892 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 SETQ01105 290 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 ACTN3Q08043 901 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 SPDYCQ5MJ68 293 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 MOXD1Q6UVY6 613 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 CCDC91Q7Z6B0 441 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 VPS36Q86VN1 386 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 SLFN12Q8IYM2 578 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 CCDC26Q8TAB7 109 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 TBC1D22AQ8WUA7 517 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 GJA10Q969M2 543 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 MBOAT7Q96N66 472 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 DHX36Q9H2U1 1008 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-205ENST00000548573 KRIT1O00522 736 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GNPATO15228 680 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 TRAPPC3O43617 180 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 CALUO43852 315 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GFPT2O94808 682 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 PAEPP09466 180 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 H2AFZP0C0S5 128 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 XRCC5P13010 732 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 AKR1B1P15121 316 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 HPDP32754 393 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 MNAT1P51948 309 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 JAM2P57087 298 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GPSM2P81274 684 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 EPHA7Q15375 998 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 H2AFVQ71UI9 128 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 EPM2AIP1Q7L775 607 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 ARMC9Q7Z3E5 817 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 PEX26Q7Z412 305 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 CYFIP2Q96F07 1278 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GPR101Q96P66 508 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 NCAPGQ9BPX3 1015 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 ACTR5Q9H9F9 607 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 A1CFQ9NQ94 594 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 TTC7AQ9ULT0 858 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 RTCBQ9Y3I0 505 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GTPBP10A4D1E9 387 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 TMCO5BA8MYB1 307 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 MYO1FO00160 1098 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 SLC16A3O15427 465 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 MED24O75448 989 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 SMTNP53814 917 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 PPP2R2AP63151 447 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 GIT2Q14161 759 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 BMT2Q1RMZ1 405 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 DPP8Q6V1X1 898 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 SLC51AQ86UW1 340 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 SYT2Q8N9I0 419 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 HES6Q96HZ4 224 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 AP1M1Q9BXS5 423 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 DDX47Q9H0S4 455 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 NEUROG2Q9H2A3 272 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 POLD4Q9HCU8 107 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 PPANQ9NQ55 473 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 FAM114A2Q9NRY5 505 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
SMARCD1-205ENST00000548573 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 UFL1O94874 794 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 FERP16591 822 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 RPL13P26373 211 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 CASP5P51878 434 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 GSCP56915 257 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 IFT88Q13099 833 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 RNF187Q5TA31 235 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 TMC3Q7Z5M5 1100 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 NT5DC3Q86UY8 548 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 DDX42Q86XP3 938 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 CENPHQ9H3R5 247 aa10.77□□□□□ -0.69
SMARCD1-205ENST00000548573 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms