RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 RAD54LQ92698 747 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 GPCPD1Q9NPB8 672 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
TMEM116-206ENST00000548283 USP20Q9Y2K6 914 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
TMEM116-206ENST00000548283 STBD1O95210 358 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 PDGFRBP09619 1106 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 MAP3K9P80192 1104 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
TMEM116-206ENST00000548283 SHCBP1Q8NEM2 672 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 SCYL1Q96KG9 808 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
TMEM116-206ENST00000548283 LIMA1Q9UHB6 759 aaKnown RBP8.03□□□□□ -1.12
TMEM116-206ENST00000548283 TPM3P06753 285 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 MAPTP10636 758 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 GNALP38405 381 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 ZBTB9Q96C00 473 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 TRIM9Q9C026 710 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 NAT10Q9H0A0 1025 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 ST6GALNAC4Q9H4F1 302 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 TAF1DQ9H5J8 278 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 GGA3Q9NZ52 723 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 DDX25Q9UHL0 483 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 UBE4BO95155 1302 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 A0A1B0GTH6 734 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 FOXN1O15353 648 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 MSH4O15457 936 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 MAP3K7O43318 606 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 TDP2O95551 362 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 BPNT1O95861 308 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 PNMA6AP0CW24 399 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 NAT1P18440 290 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 SLC16A2P36021 539 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 NFX1Q12986 1120 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 PNOCQ13519 176 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 CALCRLQ16602 461 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 DNTTIP2Q5QJE6 756 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 PNMA8AQ86V59 439 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 RIOX2Q8IUF8 465 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 TMEM139Q8IV31 216 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 RMND1Q9NWS8 449 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 CCNT1O60563 726 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 TBC1D8O95759 1140 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 CD44P16070 742 aaKnown RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 SSTR3P32745 418 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-206ENST00000548283 CHST13Q8NET6 341 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 FIZ1Q96SL8 496 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 IWS1Q96ST2 819 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 NT5C3AQ9H0P0 336 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 JADE2Q9NQC1 790 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 PDLIM7Q9NR12 457 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 INTS13Q9NVM9 706 aa8.02□□□□□ -1.13
TMEM116-206ENST00000548283 MCM7P33993 719 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 VGLL4Q14135 290 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 NR1I3Q14994 352 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 TBC1D10BQ4KMP7 808 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 CACTIN-AS1Q8N1I8 211 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 SYT2Q8N9I0 419 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 FGD4Q96M96 766 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 INPP4AQ96PE3 977 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 NUP88Q99567 741 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 MXRA8Q9BRK3 442 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 DACH1Q9UI36 760 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 ATP8B3O60423 1300 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 PASKQ96RG2 1323 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 PDCD11Q14690 1871 aaKnown RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 GOLGA6L4A6NEF3 574 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 MPHOSPH10O00566 681 aaKnown RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 INMTO95050 263 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 TNNT1P13805 278 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 ZNF165P49910 485 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 QPCTQ16769 361 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 Q3C1V9 767 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 CENPPQ6IPU0 288 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 ARMCX5Q6P1M9 558 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 UNC13DQ70J99 1090 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 DRC7Q8IY82 874 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 CCAR2Q8N163 923 aaKnown RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 CNNM3Q8NE01 707 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 SYTL5Q8TDW5 730 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 DHTKD1Q96HY7 919 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-206ENST00000548283 TIPINQ9BVW5 301 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 ASTN1O14525 1302 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L15C9J2P7 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L13C9JLJ4 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L22D6RA61 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L17D6RBQ6 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L19D6RCP7 530 aa8.01□□□□□ -1.13
TMEM116-206ENST00000548283 USP17L20D6RJB6 530 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms