RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 SLC18A3Q16572 532 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 C12orf60Q5U649 245 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 INTS8Q75QN2 995 aaKnown RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 PROM2Q8N271 834 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 MTRQ99707 1265 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZNF277Q9NRM2 450 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 HOMER3Q9NSC5 361 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 SERPINB13Q9UIV8 391 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 CCDC188H7C350 402 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 STXBP3O00186 592 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 SORBS3O60504 671 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 RPS6KA5O75582 802 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 CFBP00751 764 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ACTN1P12814 892 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 SETDB1Q15047 1291 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 IL17AQ16552 155 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 MSL3Q8N5Y2 521 aaKnown RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 AENQ8WTP8 325 aaKnown RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 A0A087X0T9 212 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 SFI1A8K8P3 1242 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 DDX39AO00148 427 aaKnown RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 FAM153BP0C7A2 387 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 FAM228BP0C875 321 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ATP11AP98196 1134 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 PLCB3Q01970 1234 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZNF211Q13398 564 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 BIRC3Q13489 604 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZKSCAN8Q15776 578 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 CDC37Q16543 378 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 FAM153CQ494X1 144 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZNF507Q8TCN5 953 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 EDEM3Q9BZQ6 932 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 FAM153AQ9UHL3 310 aa10.32□□□□□ -0.76
CALCOCO1-210ENST00000548263 MRC1P22897 1456 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 GRID2IPA4D2P6 1211 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 POTECB2RU33 542 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 FERP16591 822 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CTNNA2P26232 953 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 DDR1Q08345 913 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PPP2R5EQ16537 467 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 MEA1Q16626 185 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PTGISQ16647 500 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CROCCP2Q86T23 111 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 NEK9Q8TD19 979 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CASKIN2Q8WXE0 1202 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 UBXN6Q9BZV1 441 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 TACC3Q9Y6A5 838 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PRLRP16471 622 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 STX2P32856 288 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 DR1Q01658 176 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CERKLQ49MI3 558 aaPredicted RBP10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 C10orf76Q5T2E6 689 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PSMD1Q99460 953 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 TLR10Q9BXR5 811 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 TRIM7Q9C029 511 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 ZMYND12Q9H0C1 365 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CXorf56Q9H5V9 222 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 CD248Q9HCU0 757 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 PCDHAC2Q9Y5I4 1007 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 SPATA31A6Q5VVP1 1343 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 NPHP3-ACAD11A0A0J9YXS1 232 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 MMEP08473 750 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 BCRP11274 1271 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 DLGAP5Q15398 846 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 DNAAF5Q86Y56 855 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 FAM186BQ8IYM0 893 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 MYCBPAPQ8TBZ2 947 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 RUBCNQ92622 972 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 HVCN1Q96D96 273 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■□□ 18.3
CALCOCO1-210ENST00000548263 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 TTI1O43156 1089 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 AKR1B1P15121 316 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 FIGNQ5HY92 759 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 CENPPQ6IPU0 288 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 USP17L6PQ6QN14 398 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 OTUD6AQ7L8S5 288 aa10.3□□□□□ -0.76
CALCOCO1-210ENST00000548263 FMNL3Q8IVF7 1028 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms