RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
SVOP-202ENST00000548229 MARK3P27448 753 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 DUSP6Q16828 381 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 NME8Q8N427 588 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 IGSF9BQ9UPX0 1349 aa18.2■□□□□ 0.5
SVOP-202ENST00000548229 IGBP1P78318 339 aa18.19■□□□□ 0.5
SVOP-202ENST00000548229 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
SVOP-202ENST00000548229 RASGRP4Q8TDF6 673 aa18.19■□□□□ 0.5
SVOP-202ENST00000548229 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
SVOP-202ENST00000548229 PUF60Q9UHX1 559 aaKnown RBP18.19■□□□□ 0.5
SVOP-202ENST00000548229 PCDHA2Q9Y5H9 948 aa18.19■□□□□ 0.5
SVOP-202ENST00000548229 CACNA1AO00555 2505 aa18.19■□□□□ 0.5
SVOP-202ENST00000548229 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
SVOP-202ENST00000548229 DCHS1Q96JQ0 3298 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 FGF18O76093 207 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 INSRRP14616 1297 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 KCNA2P16389 499 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 NBL1P41271 181 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 SARSP49591 514 aaKnown RBP18.18■□□□□ 0.5
SVOP-202ENST00000548229 HDAC1Q13547 482 aaPredicted RBP18.18■□□□□ 0.5
SVOP-202ENST00000548229 MTMR3Q13615 1198 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
SVOP-202ENST00000548229 AZI2Q9H6S1 392 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 TRPC6Q9Y210 931 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 LZTS1Q9Y250 596 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 TELO2Q9Y4R8 837 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 KDM3AQ9Y4C1 1321 aa18.18■□□□□ 0.5
SVOP-202ENST00000548229 CYTH3O43739 400 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
SVOP-202ENST00000548229 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 NECTIN4Q96NY8 510 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 S1PR5Q9H228 398 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 NGRNQ9NPE2 291 aaKnown RBP18.17■□□□□ 0.5
SVOP-202ENST00000548229 C1orf112Q9NSG2 853 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 SORCS3Q9UPU3 1222 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 DOCK5Q9H7D0 1870 aa18.17■□□□□ 0.5
SVOP-202ENST00000548229 PRR23AA6NEV1 266 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
SVOP-202ENST00000548229 ATP9AO75110 1047 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 TECP42680 631 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 KRT76Q01546 638 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 SLC35G1Q2M3R5 365 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 KREMEN2Q8NCW0 462 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 VN1R2Q8NFZ6 395 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
SVOP-202ENST00000548229 SMIM35A0A1B0GVV1 85 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 TBKBP1A7MCY6 615 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 FSCN2O14926 492 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 LAG3P18627 525 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 ERVFC1P60507 584 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 TROAPQ12815 778 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
SVOP-202ENST00000548229 MTMR1Q13613 665 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 KCNC3Q14003 757 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 CES5AQ6NT32 575 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 ASCL5Q7RTU5 278 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 CATIPQ7Z7H3 387 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 RRP36Q96EU6 259 aaKnown RBP18.15■□□□□ 0.5
SVOP-202ENST00000548229 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 SEC63Q9UGP8 760 aaKnown RBP18.15■□□□□ 0.5
SVOP-202ENST00000548229 GVINP1Q7Z2Y8 2422 aa18.15■□□□□ 0.5
SVOP-202ENST00000548229 DENND3A2RUS2 1198 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 MEIS2O14770 477 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 SMARCA1P28370 1054 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 GATMP50440 423 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
SVOP-202ENST00000548229 PLCB3Q01970 1234 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 ITIH3Q06033 890 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 TMEM62Q0P6H9 643 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 WTAPQ15007 396 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 PLPPR4Q7Z2D5 763 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 COLGALT1Q8NBJ5 622 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 CASP10Q92851 521 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 NKD2Q969F2 451 aaPredicted RBP18.14■□□□□ 0.49
SVOP-202ENST00000548229 TMX1Q9H3N1 280 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
SVOP-202ENST00000548229 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 RGS18Q9NS28 235 aa18.14■□□□□ 0.49
SVOP-202ENST00000548229 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
SVOP-202ENST00000548229 GPR182O15218 404 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 RPS6KA5O75582 802 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 PDGFBP01127 241 aaPredicted RBP18.13■□□□□ 0.49
SVOP-202ENST00000548229 ITGB5P18084 799 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 KRT17Q04695 432 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 ASTLQ6HA08 431 aaPredicted RBP18.13■□□□□ 0.49
SVOP-202ENST00000548229 SYCE2Q6PIF2 218 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
SVOP-202ENST00000548229 MAP3K14Q99558 947 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
SVOP-202ENST00000548229 SPZ1Q9BXG8 430 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms