RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 PACSIN1Q9BY11 444 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 TSKSQ9UJT2 592 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 SLC29A2Q14542 456 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 EPS8L3Q8TE67 593 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 CARD9Q9H257 536 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 ASB3Q9Y575 518 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 TMEM110-MUSTN1A8MSY1 372 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 PRKAB2O43741 272 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 PAEPP09466 180 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 ALADP13716 330 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 CYP7A1P22680 504 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 ZNF131P52739 623 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 BPIFB4P59827 614 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 PTF1AQ7RTS3 328 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 TMC3Q7Z5M5 1100 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 RASGRP4Q8TDF6 673 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 PBKQ96KB5 322 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 LRRC42Q9Y546 428 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
RBFOX1-208ENST00000547372 GCP02774 474 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 BNIP1Q12981 228 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 FOXB2Q5VYV0 432 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ANKRD40Q6AI12 368 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ARHGEF3Q9NR81 526 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ARPP21Q9UBL0 812 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 PLAGL2Q9UPG8 496 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 SNX24Q9Y343 169 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 KRT13P13646 458 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 SNAP23O00161 211 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 TPBGLP0DKB5 382 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 SKIP12755 728 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 EPHB2P29323 1055 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 LIFRP42702 1097 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 CDK17Q00537 523 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 HEATR3Q7Z4Q2 680 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 FAM133AQ8N9E0 248 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ZWILCHQ9H900 591 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 FAM114A2Q9NRY5 505 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 ETNK2Q9NVF9 386 aa12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.93□□□□□ -0.34
RBFOX1-208ENST00000547372 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 CCDC169A6NNP5 214 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 PDE6AP16499 860 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 LLGL1Q15334 1064 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 CFAP157Q5JU67 520 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ERP27Q96DN0 273 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 DTNBP1Q96EV8 351 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ATXN10Q9UBB4 475 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 TBK1Q9UHD2 729 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 CREB1P16220 341 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 FGFR4P22455 802 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ECHS1P30084 290 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 LBRQ14739 615 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ISLR2Q6UXK2 745 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 NMD3Q96D46 503 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 PYM1Q9BRP8 204 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 NWD2Q9ULI1 1742 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 MYO5AQ9Y4I1 1855 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 TRAF5O00463 557 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 POLD1P28340 1107 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 GLG1Q92896 1179 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 TSG101Q99816 390 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 DMAP1Q9NPF5 467 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
RBFOX1-208ENST00000547372 ARL2BPQ9Y2Y0 163 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms