RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 TRAPPC12Q8WVT3 735 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 SEPT8Q92599 483 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
BEST3-208ENST00000547208 AIFM3Q96NN9 605 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 RAD9AQ99638 391 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
BEST3-208ENST00000547208 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 MTCH2Q9Y6C9 303 aa11.72□□□□□ -0.53
BEST3-208ENST00000547208 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 AMHP03971 560 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 ATP4AP20648 1035 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 SLC26A2P50443 739 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 IGBP1P78318 339 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 SETQ01105 290 aaPredicted RBP11.71□□□□□ -0.53
BEST3-208ENST00000547208 SSRP1Q08945 709 aaKnown RBP11.71□□□□□ -0.53
BEST3-208ENST00000547208 SCRN1Q12765 414 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 STK3Q13188 491 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 LPIN1Q14693 890 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 FBXO47Q5MNV8 452 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 KRT40Q6A162 431 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 TRIM22Q8IYM9 498 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
BEST3-208ENST00000547208 ADAMTS19Q8TE59 1207 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 APBB2Q92870 758 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 TOP1MTQ969P6 601 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 ZNF577Q9BSK1 485 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 TPCN1Q9ULQ1 816 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 CDY2AQ9Y6F7 541 aa11.71□□□□□ -0.53
BEST3-208ENST00000547208 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
BEST3-208ENST00000547208 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 DEXIO95424 95 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 GHRP10912 638 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 ANAPC15P60006 121 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 ERVK-21P61565 698 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 MRPS6P82932 125 aaKnown RBP11.7□□□□□ -0.54
BEST3-208ENST00000547208 GRB10Q13322 594 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 PRR16Q569H4 304 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 ZNF746Q6NUN9 644 aaPredicted RBP11.7□□□□□ -0.54
BEST3-208ENST00000547208 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 RSPH3Q86UC2 560 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 MYOCDQ8IZQ8 938 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 ASB2Q96Q27 587 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
BEST3-208ENST00000547208 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 PCDHA4Q9UN74 947 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
BEST3-208ENST00000547208 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
BEST3-208ENST00000547208 COL1A2P08123 1366 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 IGSF9BQ9UPX0 1349 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 SMIM35A0A1B0GVV1 85 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 CPLX1O14810 134 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 MSH4O15457 936 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 PFKFB2O60825 505 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 USP11P51784 963 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 KCNQ1P51787 676 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 NLRP5P59047 1200 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 MIS18BP1Q6P0N0 1132 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 MTHFD1LQ6UB35 978 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 TSHZ1Q6ZSZ6 1077 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
BEST3-208ENST00000547208 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 LINC01599Q8WXQ3 324 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 SYMPKQ92797 1274 aaKnown RBP11.69□□□□□ -0.54
BEST3-208ENST00000547208 SLC5A5Q92911 643 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
BEST3-208ENST00000547208 EPHX3Q9H6B9 360 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 SUGCTQ9HAC7 445 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 ZNF302Q9NR11 478 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 PLXNA4Q9HCM2 1894 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
BEST3-208ENST00000547208 STK36Q9NRP7 1315 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 BACH1O14867 736 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 HBP1O60381 514 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 DTNBO60941 627 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 SEC24BO95487 1268 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 RPLP2P05387 115 aaKnown RBP11.68□□□□□ -0.54
BEST3-208ENST00000547208 LINC00271P0C7V0 271 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 KLRC1P26715 233 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 PLA2G5P39877 138 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 AK2P54819 239 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 KRT76Q01546 638 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
BEST3-208ENST00000547208 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms