RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 SPECC1LQ69YQ0 1117 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 FGD4Q96M96 766 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 FAM20AQ96MK3 541 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 CCSER1Q9C0I3 900 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 ACBD3Q9H3P7 528 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
BRF1-208ENST00000546997 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 RGS20O76081 388 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 FCER1AP12319 257 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
BRF1-208ENST00000546997 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 PDIA5Q14554 519 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 ICE2Q659A1 982 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 C10orf67Q8IYJ2 551 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 LRRC15Q8TF66 581 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 NUDT12Q9BQG2 462 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 GEMIN8Q9NWZ8 242 aaKnown RBP18.23■□□□□ 0.51
BRF1-208ENST00000546997 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 NFE2L3Q9Y4A8 694 aa18.23■□□□□ 0.51
BRF1-208ENST00000546997 RASSF10A6NK89 507 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 H3BQF6 201 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 BCRP11274 1271 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CD44P16070 742 aaKnown RBP18.22■□□□□ 0.51
BRF1-208ENST00000546997 ZNF18P17022 549 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 STAT6P42226 847 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 MTMR1Q13613 665 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CUL4BQ13620 913 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 NIPA1Q7RTP0 329 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CABP7Q86V35 215 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 TRMT44Q8IYL2 757 aaKnown RBP18.22■□□□□ 0.51
BRF1-208ENST00000546997 TC2NQ8N9U0 490 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 FAM71BQ8TC56 605 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 PLIN2Q99541 437 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 BLZF1Q9H2G9 400 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 MED4Q9NPJ6 270 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CDC23Q9UJX2 597 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 WDR81Q562E7 1941 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 IPO5O00410 1097 aaKnown RBP18.22■□□□□ 0.51
BRF1-208ENST00000546997 AOC2O75106 756 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 PSMD10O75832 226 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CCDC175P0C221 793 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 TM4SF4P48230 202 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 NAALADL2Q58DX5 795 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 LRCH2Q5VUJ6 765 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 CAPNS2Q96L46 248 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 ZNF577Q9BSK1 485 aa18.22■□□□□ 0.51
BRF1-208ENST00000546997 PPP1R3GB7ZBB8 358 aa18.21■□□□□ 0.51
BRF1-208ENST00000546997 CRHR2Q13324 411 aa18.21■□□□□ 0.51
BRF1-208ENST00000546997 DEFB115Q30KQ5 88 aa18.21■□□□□ 0.51
BRF1-208ENST00000546997 RRAGBQ5VZM2 374 aa18.21■□□□□ 0.51
BRF1-208ENST00000546997 INPP4AQ96PE3 977 aaPredicted RBP18.21■□□□□ 0.51
BRF1-208ENST00000546997 IWS1Q96ST2 819 aa18.21■□□□□ 0.51
BRF1-208ENST00000546997 AGO4Q9HCK5 861 aaKnown RBP18.21■□□□□ 0.51
BRF1-208ENST00000546997 TLR2O60603 784 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 SEMA3FQ13275 785 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 ITGB3BPQ13352 177 aaPredicted RBP18.21■□□□□ 0.5
BRF1-208ENST00000546997 GPR142Q7Z601 462 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 RASSF8Q8NHQ8 419 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 SNX29Q8TEQ0 813 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 INTS13Q9NVM9 706 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.5
BRF1-208ENST00000546997 LCMT1Q9UIC8 334 aa18.21■□□□□ 0.5
BRF1-208ENST00000546997 MGAMO43451 1857 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 ZSWIM8A7E2V4 1837 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 GAS7O60861 476 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 PLCG1P19174 1290 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 EDNRBP24530 442 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 ADORA2AP29274 412 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 NOGQ13253 232 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 NCAPH2Q6IBW4 605 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 C17orf99Q6UX52 265 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 OTOP1Q7RTM1 612 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 VIPAS39Q9H9C1 493 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 CEP350Q5VT06 3117 aa18.2■□□□□ 0.5
BRF1-208ENST00000546997 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 EML1O00423 815 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 TRIM66O15016 1216 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 DHX15O43143 795 aaKnown RBP18.19■□□□□ 0.5
BRF1-208ENST00000546997 CHMP2AO43633 222 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 ATP9AO75110 1047 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 GRB10Q13322 594 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 ECM1Q16610 540 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 SMYD4Q8IYR2 804 aaPredicted RBP18.19■□□□□ 0.5
BRF1-208ENST00000546997 FAM107BQ9H098 131 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 ANKZF1Q9H8Y5 726 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 SAMSN1Q9NSI8 373 aaKnown RBP18.19■□□□□ 0.5
BRF1-208ENST00000546997 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
BRF1-208ENST00000546997 COBLO75128 1261 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 CPP00450 1065 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms