RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PER2O15055 1255 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 CYTH3O43739 400 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 PPFIA3O75145 1194 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 MARK3P27448 753 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 GATMP50440 423 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 CYB5R4Q7L1T6 521 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 VN1R2Q8NFZ6 395 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 ZBTB10Q96DT7 871 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 TLE6Q9H808 572 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 USP34Q70CQ2 3546 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 CACNA1HO95180 2353 aa14.7□□□□□ -0.06
SCAF11-208ENST00000546534 DOCK5Q9H7D0 1870 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 H0Y858 1186 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 STAG3L1P0CL83 205 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 ATF7P17544 494 aaPredicted RBP14.69□□□□□ -0.06
SCAF11-208ENST00000546534 GRM4Q14833 912 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 MICAL1Q8TDZ2 1067 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 ATP8B4Q8TF62 1192 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 SUSD6Q92537 303 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 FTHL17Q9BXU8 183 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 IRF2BPLQ9H1B7 796 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 TLR9Q9NR96 1032 aa14.69□□□□□ -0.06
SCAF11-208ENST00000546534 GSTTP1A0A1W2PQM5 241 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 ATP9AO75110 1047 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 PDGFBP01127 241 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-208ENST00000546534 SCG2P13521 617 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 IGBP1P78318 339 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 FOXK2Q01167 660 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 PTPN21Q16825 1174 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 XRRA1Q6P2D8 792 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 USP17L6PQ6QN14 398 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 NLRX1Q86UT6 975 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-208ENST00000546534 PIBF1Q8WXW3 757 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 SEPT1Q8WYJ6 367 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 LNPKQ9C0E8 428 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 FAM49AQ9H0Q0 323 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-208ENST00000546534 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 ERAP1Q9NZ08 941 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 PADI3Q9ULW8 664 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 SQORQ9Y6N5 450 aa14.68□□□□□ -0.06
SCAF11-208ENST00000546534 KIAA1671Q9BY89 1806 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 KCNA2P16389 499 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 TMEM62Q0P6H9 643 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 IER5Q5VY09 327 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 DIEXFQ68CQ4 756 aaKnown RBP14.67□□□□□ -0.06
SCAF11-208ENST00000546534 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 GLG1Q92896 1179 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 SENP2Q9HC62 589 aa14.67□□□□□ -0.06
SCAF11-208ENST00000546534 RRN3P2A6NIE6 340 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 PROB1E7EW31 1015 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 INSRRP14616 1297 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-208ENST00000546534 ERVFC1P60507 584 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 UBE3AQ05086 875 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 PAK2Q13177 524 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 HDAC1Q13547 482 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-208ENST00000546534 ASCL5Q7RTU5 278 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 GPRASP2Q96D09 838 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 RIPOR3Q96MK2 946 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 NEK1Q96PY6 1258 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 TMX1Q9H3N1 280 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 SMARCAD1Q9H4L7 1026 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 LRFN2Q9ULH4 789 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 PCDHB12Q9Y5F1 795 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 TRPV2Q9Y5S1 764 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 IGSF9BQ9UPX0 1349 aa14.66□□□□□ -0.06
SCAF11-208ENST00000546534 KAT6AQ92794 2004 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 M0QZ92 97 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 MEIS2O14770 477 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 FGF18O76093 207 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 RPLP2P05387 115 aaKnown RBP14.65□□□□□ -0.06
SCAF11-208ENST00000546534 ITGB5P18084 799 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 TROAPQ12815 778 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 DUSP6Q16828 381 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 SPOUT1Q5T280 376 aaKnown RBP14.65□□□□□ -0.06
SCAF11-208ENST00000546534 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 CUL5Q93034 780 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 PCYT2Q99447 389 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 CDCA3Q99618 268 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-208ENST00000546534 CELF4Q9BZC1 486 aaKnown RBP14.65□□□□□ -0.06
SCAF11-208ENST00000546534 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
SCAF11-208ENST00000546534 BAZ2BQ9UIF8 2168 aaKnown RBP14.65□□□□□ -0.06
SCAF11-208ENST00000546534 PLXNA4Q9HCM2 1894 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 PIK3CDO00329 1044 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 IFIT3O14879 490 aaKnown RBP14.64□□□□□ -0.07
SCAF11-208ENST00000546534 SP100P23497 879 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-208ENST00000546534 SARSP49591 514 aaKnown RBP14.64□□□□□ -0.07
SCAF11-208ENST00000546534 KCNC3Q14003 757 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 ANKRD54Q6NXT1 300 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 PLEKHM2Q8IWE5 1019 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 TRAPPC12Q8WVT3 735 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 CDHR1Q96JP9 859 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 TMEM260Q9NX78 707 aa14.64□□□□□ -0.07
SCAF11-208ENST00000546534 HCSTQ9UBK5 93 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms